| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0346 |
|---|
| Symbol | |
|---|
| ID | 4692778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 391605 |
|---|
| End bp | 392687 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639848129 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_995154 |
|---|
| Protein GI | 121607347 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.499232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.99105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGCA GCGATGCGGT TGCGCAGGCG CCGCAAGTCG CGCACGCCCC GGCCATTTCC
GTGACGACAG TGCGGGCGCA GGAGCGCGAT ATTCCGTTGT ATCTGGCGGG TGTTGGCACG
GCCACGGCGA ACGCCAGCGT GACGGTCAAG GCGCGCATCG ATGGCCAACT CGACAAGGTT
GGTTTTAGCG AAGGCCAGGA TGTCAGGGAA GGCCAGTTGC TGGCGCAAAT CGATCCGCGC
GCGCTGCAAG CGCAACTGGC GCAAGCGCAG GCGCAACAGG CCAGGGACCA GGCGCAGTTG
GGCAATGCGC AGGCCGATTT GCAGCGCTAT ATGACATTGC GCCGGCAAGA CGCCGCCACG
CAGCAGCAAC TCGATACGCA AAAAGCACTG GTCGCGCAAT TGGATGCCGC CGTCAAGACC
GATGAGGCGC AAATCAAATA CGCCAAGGTG CAACTCGGCT ACACCACGAT CAAGGCGCCG
ATCAGTGGCC GTGCCGGTGC GCGTCTGGTG GACCCGGGCA ATATCGTGCA CGCCGCCGAT
GCCAACGGCC TGGTGGTGAT CAACCAGATC GATCCGATGA CCGTGCAGTT CACGCTGCCG
GAAGAAGCCG TGCCGGCAAT CAATCGCGCG CAACGCGCCA GCCGCCAGCC GCTCAAGGTG
ACGGCCTATG CCCGCAGTAA TAATGATGCG CCGCTGGCGA CGGGCCAGCT GATTTTGCTC
AATAACCAGA TCGACACCAG CAGCGGCACG GTGCAGTTGA AGGCGCGCTT TGCCAATCCG
CAGCACGCGC TGTGGCCCGG CCAATATGTC AACGTCAATC TGCAAATGAG CGAGCGCGGC
ATGGCGCTGA CCTTGCCTGC CGCCGCCGTG CAGCGCAATC AGGACGGCAC CTATGTCTAT
ATCGTCAAGG CCGATGACAC CGTCGCCATC CAGCCCATCG AGGTGGTTCG CATTCAGGAT
GGCATGGCCG TCATTGGCAA GGGGCTGGCA TCGGCCCAGC GCGTCGTGCT CGATGGGCAA
TACAAACTGA AACCGGGCAG CCGCATCACC GAGGCCAGCG CTGCGAAAGG ATATGCAAAG
TGA
|
|---|
| Protein sequence | MRRSDAVAQA PQVAHAPAIS VTTVRAQERD IPLYLAGVGT ATANASVTVK ARIDGQLDKV
GFSEGQDVRE GQLLAQIDPR ALQAQLAQAQ AQQARDQAQL GNAQADLQRY MTLRRQDAAT
QQQLDTQKAL VAQLDAAVKT DEAQIKYAKV QLGYTTIKAP ISGRAGARLV DPGNIVHAAD
ANGLVVINQI DPMTVQFTLP EEAVPAINRA QRASRQPLKV TAYARSNNDA PLATGQLILL
NNQIDTSSGT VQLKARFANP QHALWPGQYV NVNLQMSERG MALTLPAAAV QRNQDGTYVY
IVKADDTVAI QPIEVVRIQD GMAVIGKGLA SAQRVVLDGQ YKLKPGSRIT EASAAKGYAK
|
|---|
| |