Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0344 |
Symbol | |
ID | 4694417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 387738 |
End bp | 388433 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639848127 |
Product | two component heavy metal response transcriptional regulator |
Protein accession | YP_995152 |
Protein GI | 121607345 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCC TGATCGTCGA AGACGAGCAC AAGATGGCAG AGTATCTCCG CAAAGGCTTG AGCGAGCAGG GCTGCACCGT CGATCTGGCC GCCAACGGCA TCGACGGCCA GCATCTGGCA ATCTGGCACG ATTATGATGT GATCGTGCTC GATGCCATGC TGCCCGGTCT GGATGGATTT TCGGTGCTGC GCTCGCTGCG CATCCTCAAA CAGACGCCCG TCATCATGCT GACCGCCCGC GACCGTGTGG AAGACCGCAT CAAAGGCTTG CACGACGGTG CCGACGATTA TTTGATCAAA CCCTTCTCGT TTCTCGAATT GCTGGCACGC TTGCAGGCGC TGACGCGGCG CGGCCGCGCA CAGGAGCCGG CGCAACTGCG CATCGGCGAC CTGCAAATCG ACCTGCTCAG CCGCAAAGCC TTGCGCAACA ACACCCGCAT CGACCTCACC GCCAAGGAAT TTGCGCTGCT GGCCATCATG GCGCGCCGCC AGGGCGAGAT ATTATCCAAG ACCGCCATCG CCGAACTGGT CTGGGACATG AATTTCGACA GCAACACCAA CGTCGTCGAA GTCGCCATCA AACGCCTGCG CGCCAAGATC GATGCGCCGT TCAGCCAGAA ACTGCTGCAC ACGATACGCG GCATGGGCTA TGTGCTGGAA CCACGCGCCA CCGCGCATGA TGGGGAAGGC GGATGA
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Protein sequence | MKILIVEDEH KMAEYLRKGL SEQGCTVDLA ANGIDGQHLA IWHDYDVIVL DAMLPGLDGF SVLRSLRILK QTPVIMLTAR DRVEDRIKGL HDGADDYLIK PFSFLELLAR LQALTRRGRA QEPAQLRIGD LQIDLLSRKA LRNNTRIDLT AKEFALLAIM ARRQGEILSK TAIAELVWDM NFDSNTNVVE VAIKRLRAKI DAPFSQKLLH TIRGMGYVLE PRATAHDGEG G
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