Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0337 |
Symbol | |
ID | 4692174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 381274 |
End bp | 381984 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639848120 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_995145 |
Protein GI | 121607338 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGGG ACCTGATCGC AGCGCATTGG CTGCTGTTCG CGCACGGTGT CGCGCTCTCG TTGGCGCTGA CCGCAGGCAC GGCGGTGCTC GGTTTGCTGA TGTCGGTGCC GTTGGCTTTT GCGCGCCACT CGACCCGCCG CCTGTGCTCG CAGCCGGTGG CTGCGTTCAC CTTCGTCGTC CGTGGCACGC CGTGCCTGGT GCAGTTGTAC CTCGTCTACT ATGGCCTGTC GCAGTTCGAG GCGGTGCGCA ACAGCTGGCT GTGGCCCTGG CTCACGAATG CCAGCTTTTG TGCGCTGCTG ACCTTTGCGA TCAATACGAC GGCCTACACC ACCGAGATTC TTTCTGGCGC ATTGGCCCGC TTGCCGCCGG GAGAAATCGA GGCCGGGCAA AGTTTTGGCA TGTCGCGCTG GACCTTGGTG CGCCGTATCC AGGTGCCGGC GATGCTGCGC CGCGCATTGC CGCAGTACGC CAACGAGATC ATCATGCTGC TGCACATGAC CTCGCTGGCG GGCCTGGTCA CATTGCTCGA CATCACCGGG GCCGCCCGCT TCATCAACGC GGAGTTTTAT CTGGCTTTCG AGCCCTTCAT CACCGCCGGC GCTTTGTACC TGGCGATCAC GCTGGTGCTG GTCCGATGCT TTGGTGCCGC CGAGAATCGC TGGCTCGCGC ATCTGCGGCC CAGGCACAGC CCGATCCAGA TGCGCTCTTG A
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Protein sequence | MNWDLIAAHW LLFAHGVALS LALTAGTAVL GLLMSVPLAF ARHSTRRLCS QPVAAFTFVV RGTPCLVQLY LVYYGLSQFE AVRNSWLWPW LTNASFCALL TFAINTTAYT TEILSGALAR LPPGEIEAGQ SFGMSRWTLV RRIQVPAMLR RALPQYANEI IMLLHMTSLA GLVTLLDITG AARFINAEFY LAFEPFITAG ALYLAITLVL VRCFGAAENR WLAHLRPRHS PIQMRS
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