Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0318 |
Symbol | |
ID | 4694744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 362532 |
End bp | 363395 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639848101 |
Product | regulatory proteins, IclR |
Protein accession | YP_995126 |
Protein GI | 121607319 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000583044 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTT TCCATTGGTC AAGCATCAAA AATCAGAGGC ATGGCGTAGC ATCGGACAGG CGGGCACAGG CGCCGCGACA CATGAAGGAG CAGTTTTTGG GTTCGGATAA CTTGTTCGTG CAATCGCTTG CCAAAGGCAT TGGATTGCTG GAAGCCCTGG GAGCGCGCCC CGGTGCCCTG AGCCTGACCG ACTTGGCCGA CCTGACGGGA ATGGATCGCA GCACGACGCA GCGCATGACG CATACGCTGG TGCAGTTGGG CTATATCGAG AAGGGCGCCA ACGGCCGCGG CTTCGTGCCG GGCCGCAAGA TCCTCGATCG CACCTTCGAC TACCTCAGCC ACAACCTGCT GATCGAACGG GCGAGCCCGA TCCTGACAGA CCTGCAGCGC GAGGCCGGCG AGCGCGTGGA CCTGAGCCTG TTCGACGACC TGTCCATCAT TTACGCTTGG CGGCGCCAGA CGAAGCGGCA GACCTTCTTT GCCACGCTGG TGGGACGCCG GATCCCGTGC TATTGCTCGT CAGGGGGAAG GGCGATCATG TCGCACCTGC CGCAGCAGCG CGTCGACGAC ATCCTTGCGC GTTCGACGCT GCGACCGATC ACGCCCAAGA CCGAAACCGA TGTGGCGGTC ATCAAGCGCC GTATCGCACA GGCGCGGGAG TCGAATTACG CGCTGGCCCT GGAGGAAACA CTGCTGGGCG AAATCGCGGT GGGCTGCGCG ATCCTCGACC ATGACCGGCA GCCGATGGCC GCGCTGCACA TCGCCGGATC GCTGTCAGAG TGGACTGTGG AGGCCTTCGT CCAGCGCTTC ACGCCGTTGG CCATCGAAGC GGCGCGTGCG CTCGGAGGCG GCATACCGCG TTAA
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Protein sequence | MSFFHWSSIK NQRHGVASDR RAQAPRHMKE QFLGSDNLFV QSLAKGIGLL EALGARPGAL SLTDLADLTG MDRSTTQRMT HTLVQLGYIE KGANGRGFVP GRKILDRTFD YLSHNLLIER ASPILTDLQR EAGERVDLSL FDDLSIIYAW RRQTKRQTFF ATLVGRRIPC YCSSGGRAIM SHLPQQRVDD ILARSTLRPI TPKTETDVAV IKRRIAQARE SNYALALEET LLGEIAVGCA ILDHDRQPMA ALHIAGSLSE WTVEAFVQRF TPLAIEAARA LGGGIPR
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