| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0313 |
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| Symbol | |
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| ID | 4692796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 357214 |
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| End bp | 357969 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639848097 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_995122 |
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| Protein GI | 121607315 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.291293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTTTT CCGGTCGCAC CGTGGTCGTC ACGGGCGCCA ACAGCGGCAT TGGTCGCGCG
ACGGCCGTGC GCTTGGCCGG GGAAGGCGCG CGCGTGCTGG CCGTGGACCT GCGCACCGAT
GCGCTCGCGG ACATCGGCGT CGAGCCGCTG GCCATCGACC TGGGCACCGA GCAAGCGCCG
GCACGCACGG TGGCGGCCGC GCGCGCTTTC GGCGCCGGGC GCGTGGACTG CCTGGTCAAC
AATGCCGGCA TCGGTGGCTC GAAGGCCCTC ACCGCAAGCG ACGATGCCTC GATCGACCGC
ATTCTCGGCG TCAATCTTCG CGCTGTCTTG CGGCTCACGC GCGACATGCT TGCGATCATG
TCCGACGGCG GCAGCATCGT GAACCTGGCC TCCGTTTTTG GCGAGATCGG CTATCCGAAC
TCGGCAGCCT ATGCGGTGGC CAAGGGGGGC ATATCCCAGT TGACGCGGCA ACTGGTCGCG
GACCTCTCGT GGCGTGGCAT CCGCGTCAAC GCCGTGGCGC CCGGCGTGAT TCGCACTGCG
ATGACTGCGC ATTGGCTGGA CCATGACGAG CAGTACCGGC GCAACATGAC CGGATCGACC
CCGCTCGGAT TTGTCGGCAC GCCGGAGCAT GTCGCTGCGG TCATCGCCTT TCTGTGCAGC
CCGGACGCAG CCTTCGTGAC CGGCCAGGTG ATCGCGGTGG ACGGCGGATG GCTGACCTGC
CGCGCCCATG GCACCGCGCC AAGCGAAGTT TCCTGA
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| Protein sequence | MRFSGRTVVV TGANSGIGRA TAVRLAGEGA RVLAVDLRTD ALADIGVEPL AIDLGTEQAP
ARTVAAARAF GAGRVDCLVN NAGIGGSKAL TASDDASIDR ILGVNLRAVL RLTRDMLAIM
SDGGSIVNLA SVFGEIGYPN SAAYAVAKGG ISQLTRQLVA DLSWRGIRVN AVAPGVIRTA
MTAHWLDHDE QYRRNMTGST PLGFVGTPEH VAAVIAFLCS PDAAFVTGQV IAVDGGWLTC
RAHGTAPSEV S
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