| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0297 |
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| Symbol | mnmA |
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| ID | 4690789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 334157 |
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| End bp | 335269 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639848081 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_995106 |
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| Protein GI | 121607299 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.188258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCT CCCCCAAGCA GCGCGTCGTC GTCGGCCTGT CCGGCGGCGT GGACTCGGCC
GTCACCGCCT ACCTGCTGCG CCAGCAGGGC CATGAGGTGG TCGGCATCTT CATGAAGAAC
TGGGAAGACG ATGACGACGG CGGCTACTGC CCGTCGGGCA CCGACTTCGT CGACGCCGCT
GCCGTGGCCG ACGTGATCGG CATCGAGATC GAGCATGTGA ACTTCGCGGC CGACTACAAG
GAGCGCGTGT TCGCCGAGTT CCTGCGCGAG TACCAGGCCG GCCGCACACC CAACCCCGAT
GTGCTGTGCA ACGCCGAGAT CAAGTTCAAG GCCTTTCTGG ACCATGCGCT GCGTCTGGGC
GCCGAGAAAA TCGCCACCGG CCACTACGCC GGCGTGCGCC GGAACCCGGC CTCGGGCCGG
TTCGAGCTGC TCAAGGGGGC AGACCCGGCC AAAGACCAAA GCTACTTTTT GCACCGGCTG
GACCAGCGGC AGTTGTCCAG AACGCTGTTC CCGCTGGGCG CGCTGCGCAA GACCGAGGTG
CGGCGCCTGG CCGAGGACAT CGGCCTGCCC AACGCCAGGA AGAAGGACTC GACCGGCATC
TGCTTCATCG GCGAGCGGCC GTTTCGCGAG TTCCTGAACC GCTATATCGG CCCCGCCCCC
GGCCCCATCG AGGACGACCG GGGCCGCGTT CTGGGCCAGC ATTCGGGACT GAGCTTCTAC
ACCCTGGGCC AACGACAGGG GCTGGGCATA GGCGGCCTCA AGGAGCAGGG CGCGCAGCGT
GGCGGCGGTG CGCATGCGCC CTGGTTCGTG GCCCGCAAGG AACTGGCCAC GAACACCTTG
CGCGTGGTGC AAGGGCATGA CCACCCCTGG CTGCTGTCCC GTGCCCTGGA GGCCCAGGAC
GCGCGCTGGA TTTGCGGCGC GGCCCCGGCC CCGGGCCGCT ATGCGGCCAA GACCCGGTAC
CGGCAGCAAG ATGCGTCATG CACGATGGCC AGCGCCGGGC AGGCCGGCTT TCGCCTGCAC
TTTTCCGAGG AGCAATGGGC CGTGACGCCC GGGCAAAGCG CGGTCTTGTA TGACGGCAAC
GTCTGCCTGG GGGGCGGGGT GATTGCGGGA TGA
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| Protein sequence | MTASPKQRVV VGLSGGVDSA VTAYLLRQQG HEVVGIFMKN WEDDDDGGYC PSGTDFVDAA
AVADVIGIEI EHVNFAADYK ERVFAEFLRE YQAGRTPNPD VLCNAEIKFK AFLDHALRLG
AEKIATGHYA GVRRNPASGR FELLKGADPA KDQSYFLHRL DQRQLSRTLF PLGALRKTEV
RRLAEDIGLP NARKKDSTGI CFIGERPFRE FLNRYIGPAP GPIEDDRGRV LGQHSGLSFY
TLGQRQGLGI GGLKEQGAQR GGGAHAPWFV ARKELATNTL RVVQGHDHPW LLSRALEAQD
ARWICGAAPA PGRYAAKTRY RQQDASCTMA SAGQAGFRLH FSEEQWAVTP GQSAVLYDGN
VCLGGGVIAG
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