Gene Veis_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0291 
Symbol 
ID4693658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp326949 
End bp328154 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content66% 
IMG OID639848075 
Productextracellular ligand-binding receptor 
Protein accessionYP_995100 
Protein GI121607293 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.512826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTCCA CATTCGTGCG CCGCTGCCGG GGGCTTGTCC CGGCCTTTGC CGCCGCAACC 
TTCGCGGCCG CCACGCCGGG CCTGGCGCAA GACATCAAGA TCGGCTACAT CAGCGACATG
AGCGCCAGCG GCGCGGCCGA GTTTGGCCTC GGCGCCCTCT GGGGCGCGCA GCAGGCCGCG
CAGGACATCA ACGCCGCTGG CGGTGTCCTC GGACGCCCGC TCGCCATCGT CGCGCGCGAC
GACATGGCCC AGCCGCCGAA AGCGATCCAG GGCGTGACCG AACTGCTCGA CAGCGAAAAA
GTCGTCGCGC TGATCGGCTC GGCCAACTCC GGCAACGTGC TGGCTTGGCT GCATCTGCCG
CAGCAAAAGA AGATCCCGGT GATCTCGCCC ATCGCCACCG CGACCGACAT CACCAAACGC
TTCGAGAGCT CGGGCGAGAA CTACATCTTC CGCGTCTCGA TGGTCGACCG CGACCAGATC
GCGCTGCTCG TCGCCTATGC CGTCAAGGCC ACGAAGAACA AGAAAATCGC CTTCCTGGCC
GATTCCACCG GCTACGGCCA GCAGGGCATG AAGGACCTGC TGGCGGTGCT CAAGCTGCAC
GCGCTCGACC CCGTGGCGCA GGAGAAGTTC GGCGGCAAGG ACACCGACAT GACCTCGCAA
CTGAGCAAGA TCAAGGCCGC AGGCGCGGAC ACGCTGATCA TCTACGGCCT GGCCGACGCC
AACGCCTACG TGCTGCGCAG CATGGAGAAG GTGAACTACT TTCCCGTCAC GCTGGGCGCG
TGGGGCAACA TCAACACGCC GCTGCTCCAA CTGGCCGGCC CCGCGCTCGC TGCCAAGCTG
ATCTTCACCG CCTCCAGCAC CGCGACGAGC ACCCCCAAGG CTGCCGCGCT CAACGCCCGG
CTGCTGGACA AGCACCCGAA GATGACTGCC TTCGTCACTG CGGCGCAGGC CTACGACGCG
GTGCTGCTGC TCGCCACCGC GATGAAGGCG GCCGGCTCGA CGCAGGGGCC GCAGGTGCAG
CAGGCGCTGG AGAATCTGCC GCAGGTCGAG GGCATCGTCA AAACCTACGA CAAGCCCTTT
GGCAAGACCA ATCACGAGGC GCTGTCCGTG GCCGACTTCC ACCTCGCGCA GTGGCAGGCT
GGCCGCGTCG TCTGCTACGA CGATGCGATC ACCAGGACGA TCACGCCGGA AAACCTGAAG
CAATGA
 
Protein sequence
MLSTFVRRCR GLVPAFAAAT FAAATPGLAQ DIKIGYISDM SASGAAEFGL GALWGAQQAA 
QDINAAGGVL GRPLAIVARD DMAQPPKAIQ GVTELLDSEK VVALIGSANS GNVLAWLHLP
QQKKIPVISP IATATDITKR FESSGENYIF RVSMVDRDQI ALLVAYAVKA TKNKKIAFLA
DSTGYGQQGM KDLLAVLKLH ALDPVAQEKF GGKDTDMTSQ LSKIKAAGAD TLIIYGLADA
NAYVLRSMEK VNYFPVTLGA WGNINTPLLQ LAGPALAAKL IFTASSTATS TPKAAALNAR
LLDKHPKMTA FVTAAQAYDA VLLLATAMKA AGSTQGPQVQ QALENLPQVE GIVKTYDKPF
GKTNHEALSV ADFHLAQWQA GRVVCYDDAI TRTITPENLK Q