Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0291 |
Symbol | |
ID | 4693658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 326949 |
End bp | 328154 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639848075 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_995100 |
Protein GI | 121607293 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.512826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTTCCA CATTCGTGCG CCGCTGCCGG GGGCTTGTCC CGGCCTTTGC CGCCGCAACC TTCGCGGCCG CCACGCCGGG CCTGGCGCAA GACATCAAGA TCGGCTACAT CAGCGACATG AGCGCCAGCG GCGCGGCCGA GTTTGGCCTC GGCGCCCTCT GGGGCGCGCA GCAGGCCGCG CAGGACATCA ACGCCGCTGG CGGTGTCCTC GGACGCCCGC TCGCCATCGT CGCGCGCGAC GACATGGCCC AGCCGCCGAA AGCGATCCAG GGCGTGACCG AACTGCTCGA CAGCGAAAAA GTCGTCGCGC TGATCGGCTC GGCCAACTCC GGCAACGTGC TGGCTTGGCT GCATCTGCCG CAGCAAAAGA AGATCCCGGT GATCTCGCCC ATCGCCACCG CGACCGACAT CACCAAACGC TTCGAGAGCT CGGGCGAGAA CTACATCTTC CGCGTCTCGA TGGTCGACCG CGACCAGATC GCGCTGCTCG TCGCCTATGC CGTCAAGGCC ACGAAGAACA AGAAAATCGC CTTCCTGGCC GATTCCACCG GCTACGGCCA GCAGGGCATG AAGGACCTGC TGGCGGTGCT CAAGCTGCAC GCGCTCGACC CCGTGGCGCA GGAGAAGTTC GGCGGCAAGG ACACCGACAT GACCTCGCAA CTGAGCAAGA TCAAGGCCGC AGGCGCGGAC ACGCTGATCA TCTACGGCCT GGCCGACGCC AACGCCTACG TGCTGCGCAG CATGGAGAAG GTGAACTACT TTCCCGTCAC GCTGGGCGCG TGGGGCAACA TCAACACGCC GCTGCTCCAA CTGGCCGGCC CCGCGCTCGC TGCCAAGCTG ATCTTCACCG CCTCCAGCAC CGCGACGAGC ACCCCCAAGG CTGCCGCGCT CAACGCCCGG CTGCTGGACA AGCACCCGAA GATGACTGCC TTCGTCACTG CGGCGCAGGC CTACGACGCG GTGCTGCTGC TCGCCACCGC GATGAAGGCG GCCGGCTCGA CGCAGGGGCC GCAGGTGCAG CAGGCGCTGG AGAATCTGCC GCAGGTCGAG GGCATCGTCA AAACCTACGA CAAGCCCTTT GGCAAGACCA ATCACGAGGC GCTGTCCGTG GCCGACTTCC ACCTCGCGCA GTGGCAGGCT GGCCGCGTCG TCTGCTACGA CGATGCGATC ACCAGGACGA TCACGCCGGA AAACCTGAAG CAATGA
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Protein sequence | MLSTFVRRCR GLVPAFAAAT FAAATPGLAQ DIKIGYISDM SASGAAEFGL GALWGAQQAA QDINAAGGVL GRPLAIVARD DMAQPPKAIQ GVTELLDSEK VVALIGSANS GNVLAWLHLP QQKKIPVISP IATATDITKR FESSGENYIF RVSMVDRDQI ALLVAYAVKA TKNKKIAFLA DSTGYGQQGM KDLLAVLKLH ALDPVAQEKF GGKDTDMTSQ LSKIKAAGAD TLIIYGLADA NAYVLRSMEK VNYFPVTLGA WGNINTPLLQ LAGPALAAKL IFTASSTATS TPKAAALNAR LLDKHPKMTA FVTAAQAYDA VLLLATAMKA AGSTQGPQVQ QALENLPQVE GIVKTYDKPF GKTNHEALSV ADFHLAQWQA GRVVCYDDAI TRTITPENLK Q
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