Gene Veis_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0288 
Symbol 
ID4693541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp323364 
End bp324089 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content69% 
IMG OID639848072 
ProductABC transporter related 
Protein accessionYP_995097 
Protein GI121607290 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCCG GCCCGCTGCT GCAGTTGGAG CGCGTCTCGG TGCGCTACGG CGCGATCGAG 
GCGCTGCGCG AGGTTTCCAT CGAGGTCGGT GCCGGCGAAA TCGTCACGAT CATCGGCGCC
AACGGCGCCG GCAAGAGCAG CCTGCTCAAG AGCATCGCCG GGCTGGAGCC GATCGCGTCG
GGGCGCATCC TGATCGATGG CCGGGACATC GGCGCGATAC CCGCCCACAA GCGCCTGCAA
TGCGGCGTAA CGCTCGCGCC CGAAGGCCGT GGCATCTTTC CCGACCAGAG TGTGCTCGAC
AACCTGCTGC TCGGCGCGTA CAGCCTGCAG GCCACGGCGG CCGAAATCAA CGCCCTGGTC
GGCCATGGTT TCGAGCTCTT CCCGCGCCTC GCGCAGCGCC AGGCGCAGTG GGCCGGAACG
CTCTCCGGCG GGGAGCAGCA GATGCTGGCG CTGGCGCGCG CGCTGATGAG CAAGCCACGG
CTGCTGCTGC TCGACGAGCC CTCGCTGGGC CTGGCGCCGC TGGTCATCCG CGACATCTTG
CGCAGCATCC GCGTGCTGCG CGACGCGGGG CTGACCATCT TGCTGGTCGA GCAAATGGCG
CACCAGGCGC TGGCGCTGGC CGACCGTGGC TATGTGCTCG AAACCGGCCG CATCACCCTC
GAAGGCAGCG GCAGCGCGCT GCTGGCCAAC CCCGGCATCC GGGCGTTCTA TCTCGGCGCG
CATTAG
 
Protein sequence
MKSGPLLQLE RVSVRYGAIE ALREVSIEVG AGEIVTIIGA NGAGKSSLLK SIAGLEPIAS 
GRILIDGRDI GAIPAHKRLQ CGVTLAPEGR GIFPDQSVLD NLLLGAYSLQ ATAAEINALV
GHGFELFPRL AQRQAQWAGT LSGGEQQMLA LARALMSKPR LLLLDEPSLG LAPLVIRDIL
RSIRVLRDAG LTILLVEQMA HQALALADRG YVLETGRITL EGSGSALLAN PGIRAFYLGA
H