| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0277 |
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| Symbol | |
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| ID | 4693210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 307102 |
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| End bp | 308307 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639848061 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_995086 |
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| Protein GI | 121607279 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CCCTGCACCT GGCCGAACAG CTCATTGCCC GGCCTTCGAT CACCCCCGAT
GACGCGGGCT GCCTTGATCT GCTGGCCGCC AGGCTGGCGC CGCTGGGCTT CGTCTGCGAG
CGCATGGACA GCGGCCCGGC CCGGCAGCGC GTCAGCAACC TATGGGCAAA ACGGCCCGTT
GCGCAGGTGC CGGATGCGCA TGACGCCAGC AAAACGGCAG TCAAAACCAT CGTCTTCGCG
GGCCACACCG ATGTCGTACC CACCGGCCCA CTGGAGCAGT GGAGCAGCAA CCCGTTTTTG
CCCACCCGCA GGGATGGCCG GCTCTATGGC CGTGGCGCCA GCGACATGAA GACCTCGATT
GCCGCTTTCA TCGTGGCGCT CGAAGAATTC CTGGCGGCCA CGCCCGAGCC CCGTATCGCT
CTGGCGCTGC TGCTGACCAG CGACGAGGAA GGCCCCTCGG TAGACGGCAC CCGGGTGGTG
GTCGAGCAAC TCAAGGCACG CGGCGACAGC ATCGACTACT GCATCGTCGG CGAACCCACC
GCCGTCGAAA AAACCGGCGA CATGGTCAAG AACGGCAGGC GCGGCACGCT CAGCGGCCGG
CTGCTCGTGC GCGGCATACA GGGGCATATC GCCTATCCGC AACTGGCACG CAACCCGATC
CACCAGGCCC TGCCCGCCCT GGCGGAGTTG GCCGCCACCG AGTGGGACCA GGGCAATGAA
TTCTTCCCGC CCACCAGTTG GCAGATCAGC AACCTGCACG CAGGCACCGG CGCCACCAAC
GTGATTCCCG GCGAGATGGT GCTGGACTTC AACTTCCGCT TCTCCACGCA ATCGTGCGCC
GAAGGTCTGC AACGACATGT GCAGCAACTG CTCGAACGCC ACGGCCTGAG CTACGAACTG
CACTGGACGC TGGGCGGCCA GCCGTTTCTG ACCACGCCGG GCGAACTGCT GCAAGCCGTC
GAGCAAGCGA TCAGCGCCGA AACCGGGCTG AGCGCCGCGC TCTCGACCAC CGGCGGCACC
AGCGACGGCC GCTTCATTGC CCACATCTGC CCGCAGGTGA TCGAACTCGG CCCGCCCAAC
GCCAGCGTCC ACAAGATCGA CGAGCATGTG CTGCTGACCG ACATCGAAGC GCTCAAGAAC
ATCTACCGCC GCACACTGGA AAACCTGCAA GCGCAGGCAT TGGCCGCAGC GACGATGCCG
GCATGA
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| Protein sequence | MTRTLHLAEQ LIARPSITPD DAGCLDLLAA RLAPLGFVCE RMDSGPARQR VSNLWAKRPV
AQVPDAHDAS KTAVKTIVFA GHTDVVPTGP LEQWSSNPFL PTRRDGRLYG RGASDMKTSI
AAFIVALEEF LAATPEPRIA LALLLTSDEE GPSVDGTRVV VEQLKARGDS IDYCIVGEPT
AVEKTGDMVK NGRRGTLSGR LLVRGIQGHI AYPQLARNPI HQALPALAEL AATEWDQGNE
FFPPTSWQIS NLHAGTGATN VIPGEMVLDF NFRFSTQSCA EGLQRHVQQL LERHGLSYEL
HWTLGGQPFL TTPGELLQAV EQAISAETGL SAALSTTGGT SDGRFIAHIC PQVIELGPPN
ASVHKIDEHV LLTDIEALKN IYRRTLENLQ AQALAAATMP A
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