Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0264 |
Symbol | |
ID | 4690693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 292003 |
End bp | 292632 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639848048 |
Product | isochorismatase hydrolase |
Protein accession | YP_995073 |
Protein GI | 121607266 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.277622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCTTG ACGCCACCGA CTCCCAACTC GTCCTGATCG ACTACCAGGA GCGCCTGATG CCCGCCATCT TCGACGGCCC CGCCGTGCTG GCCAATGCCC GCCGCCTGGC CGGGATCGCC CGCATGATCG ACATACCCGT GTGGGGCACC GAGCAAAACC CCGCGCGCCT GGGCGCCAAC GACGCCGCGC TGCGCGCCCA GTGCCGCAAG ACGCTGGCCA AGATGCGCTT CAGCGCTGCC CAAGAGGGCC TGGGCGACTG GCTGCGACCG CCCGCCAAGC CCCAGGGCAG CGCTCCGGGC GAAACCCGGG GCGGGAATGT GCGCAGCCTG CCCAGACAAC TGCAAAAGCC CGCCGTCGCA GCCTGCGCCG AGCGCGCCAG CATCGTCATC GCCGGTTGCG AAGCCCATGT GTGCCTGTTG CAAACCGCGC TGGACCTGAT CGACGACGAC TTCGAGCTGT GGGTGGTCAC CGACGCCTGC GGTTCGCGCA CCGAACGCAA CCGCGACGCC GCCTTCGACC GCCTGGCCGC TGCCGGCGCC GAACTGGTCA CGACCGAGAT GGTGGCGTTC GAATGGCTGG GCAGTTGCGC GCATCCGGCG TTCAAACCGG TGCTCGGGCT GATCAAGTAG
|
Protein sequence | MLLDATDSQL VLIDYQERLM PAIFDGPAVL ANARRLAGIA RMIDIPVWGT EQNPARLGAN DAALRAQCRK TLAKMRFSAA QEGLGDWLRP PAKPQGSAPG ETRGGNVRSL PRQLQKPAVA ACAERASIVI AGCEAHVCLL QTALDLIDDD FELWVVTDAC GSRTERNRDA AFDRLAAAGA ELVTTEMVAF EWLGSCAHPA FKPVLGLIK
|
| |