| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0220 |
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| Symbol | |
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| ID | 4692693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 241008 |
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| End bp | 242807 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639848005 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_995030 |
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| Protein GI | 121607223 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.205881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG TCCCGATGTC TTTGCCGAAG ACAGGGGTGC TTGAAAGCCA TCAAATCATG
TCCGCCATGG AGACACCAAA GACAGGTTCG AGCAGCACCG CCCTGCATGC ATTGCGCGGC
GTGTTGGTCT TGGGCGCGGA TGGCAAAGCG ATGGCCACCA ATGGCATTGC ACTGCAACCT
GCGGTGGCCC GTTGCATCCT TGCCGCATGG CATGAAGCCC GCCGGCGCCA GCGCAAGGTC
TTTCCCGCCG AGACGCCGGA CGGCGCGCCG ATCGTGGTGG TGGCCCTGCC GGCGGCAGAC
GCCACGGTGC TGGTCGCGAT GGAGCGCGAC AGCCGCGACG CGCTCTTCGA GTTCGTTGGT
GCCGTCGATT TCGCGGCCGA CATCCTGGCG CACTTCCTGA CCAATCCGTT TGAGGCCTTG
AGCGTCGTCG ATCGGCAGGG CATCGTCCGC TACATGAGCC CGGTGCACGA ACGCTTCTTC
GGCCTGCCGC CGGGCGGCGG CACCGGCCGC CATGCCACCG AAGTGATCGA GAACTCGCGG
CTGCACCATG TGGTCGCCTC CGGCAAGGCA GAGATCGGTT TGCTGCACGA AATGCGCGCC
ATCACCCGCG TGGTATCGCG CCACCCGATC CGCAACCGCC ACGGGGATAT CGTCGGCGCG
ATCGGGCAGA TCATGTTCAA AGGGCCGGAG CAACTGCAGG CATTGTCTGC CGAACTATCG
AAGCTCAAGT CCGAAGTCGC TTATTACCGG CGCGAGCTCA GCGACCTGCG CAACCGCAGC
TACGGCCTCG ATCAAATCCT GGGCAACAGC CCGGCGATGC AACGCCTCAA GCAGCAGATC
GTCAAGCTCG CGCCGCTGGA CGTTCCGGTG CTGCTGACCG GCGAAAGCGG CACCGGCAAG
GAGCTTGCAG CCCATGCGAT CCACAAGCTC AGCCCCCGGC GCGATGACAC GTTGGTGATG
GTCAACGCTG CCGCCCTGCC TGCCACGCTG GTTGAAAGCG AGCTTTTTGG CTACGAGGCC
GGCTCCTTCA CCGGGGCCGA GCGCAAGGGT CGCAAGGGCA AGATCGAGCA GGCCGATGGC
GGCTCACTGT TCTTCGATGA GGTCGGAGAC ATGCCGGCGG ATGTGCAGGT CAAGCTGTTG
CGCGTGCTGC AAGATGGCAA CTTTCAGCGC GTGGGCGGCA ACGAACTGCG CCACTCCAAC
TTCCGCCTCA TCAGCGCCAG CAACCGCGAC TTCGAGGCCA TGATCGCCAA CGGTTCGTTC
CGGCTGGACC TGTTTTACCG GATCGGCGGC GTGACCATCC GCATGCCCTC GCTGCGCGAG
CGGATCGAGG ACATTGCGCA ATTGGCGGAA CTGGCGCTCC GGCAGTTTGC CGAGCGGCAC
CGGCAACGCC CGAAAAAGCT CTCGGACGCG GCCTGCGAGT TCCTGCAAAA CCAGCGCTGG
CCGGGCAATG TGCGGCAGTT GATGCACACC GTCGAGCGCG CGGCCATCTT CTGCGAATCC
GAGGTGGTCG TGCCAGCCGA CTTCGGGATC ATCGACGCCG ATCCGGCCGA ACTGCCGCCG
ATGCTGTCCG ACGGCGCAGG CCATGCCGCC CTGGCGTTGA CTGGCGCGGC GCCACGCGCG
TCACTGCGCG TCAGCAACGC GGTGGAACAA GTGGAAGAGC AACTGATTCG GCAGGCCATG
GCCCGGCTGC AAGGCAACAA GAAACGTGTC GCCGCCGAAC TGGGTATCTC ACGCTCCTAC
CTGTACAAGC GGCTGGCGCA AATCGGCCTG GGTGCCGCCA CCGGATCAGC GCTCAGTTGA
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| Protein sequence | MIIVPMSLPK TGVLESHQIM SAMETPKTGS SSTALHALRG VLVLGADGKA MATNGIALQP
AVARCILAAW HEARRRQRKV FPAETPDGAP IVVVALPAAD ATVLVAMERD SRDALFEFVG
AVDFAADILA HFLTNPFEAL SVVDRQGIVR YMSPVHERFF GLPPGGGTGR HATEVIENSR
LHHVVASGKA EIGLLHEMRA ITRVVSRHPI RNRHGDIVGA IGQIMFKGPE QLQALSAELS
KLKSEVAYYR RELSDLRNRS YGLDQILGNS PAMQRLKQQI VKLAPLDVPV LLTGESGTGK
ELAAHAIHKL SPRRDDTLVM VNAAALPATL VESELFGYEA GSFTGAERKG RKGKIEQADG
GSLFFDEVGD MPADVQVKLL RVLQDGNFQR VGGNELRHSN FRLISASNRD FEAMIANGSF
RLDLFYRIGG VTIRMPSLRE RIEDIAQLAE LALRQFAERH RQRPKKLSDA ACEFLQNQRW
PGNVRQLMHT VERAAIFCES EVVVPADFGI IDADPAELPP MLSDGAGHAA LALTGAAPRA
SLRVSNAVEQ VEEQLIRQAM ARLQGNKKRV AAELGISRSY LYKRLAQIGL GAATGSALS
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