| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0218 |
|---|
| Symbol | |
|---|
| ID | 4691080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 238388 |
|---|
| End bp | 239488 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639848003 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_995028 |
|---|
| Protein GI | 121607221 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.32275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CTGCATGGCA GGCGCCGCCA CAGGCGCTGC GCGGGGTGCG TGTGCTCGAC
TTCAGCCACG TCATCGCCGG CCCGTTCGCC ACCTTTCAGT TGGCCCGGAT GGGCGCCGAG
GTGATCAAGG TCGAGCGCCC CGGGGGCGGC GATGTGATGC GCCGCAGCGG ATCCGGCGCC
CACGCGTTCA CGGCGCTCAA CGCGGGCAAG CAGGCGCGCG CCATCGACCT GGCCACGCCG
CCGGGCCGGG CCGAGGCGCT GGACCTCGCG CGCCAGGCCG ACCTGATGGT GGACAACTAC
CGCCCCGGGG TGCTCGAACG CCATGGCCTG GGCTACGAAC AGGTCAAAGC CATCAACCCG
CGCATCGTGT ACTGCGCCAT TTCTGGCTAC GGCCGCAGTG ACCCGGCACT GGCAGCGCGC
GGCGCCTACG ACCATGTGGT GCAGGGGCTG ACCGGCATGG CGATGCTGGC CGGCCAGGAA
TGCGACCCGC CGATCAAGGT CGGCTTTCCG GTCATCGACG CGGCCACCGG CTTGGTAGGT
GCGCTGGCCA TGATGGCTGC ACTGCGCGAA CGCGACCAGA CGGGCCACGG CAGCTTTCTC
GACGTGAGCA TGTGGGCGAG CGCCCTGCAA CTGATGTACC CGTTCGCCTG CGATGTGCTG
AGCACCGGGC AGGAGATCGC GCGGGTGGGC AACAAGGGCT TTTCTGGCAG CCCGGCGGCC
GACATGTTCG CCTGCCGCGA CGGGTGGCTG GCGCTCGGGG CCAACACGCC GCAGCACATC
GCGGCACTGA TGCAGGTGCT GGGCGTCGAC CCGCAACGCT ATGCCCCGCT GCTGGACGCC
GGCTCCGGCA AAGGCCCCGC GTTCGCACGG GCCCGGGACC CCGCCGCCTT TCGCGAACTG
CTGGCCGAGC AACTGGCCGG CCATCCGGCC GCCGAGTTGG AACAGCGCCT GAACGACGCC
GGCGTGCCGG CCGCGCGCGT GCGCAGCCTG CGTGAATTCA CGCAGCAGGC CGTGGACACC
GGCTTGCTGC AGCCGCTGGT GCTTGGCGCG GGCGAGGAGC GCGCCGTCAC GCCCGGCCTG
GGCTGGCGGG TGGCCCGGTG A
|
|---|
| Protein sequence | MSAAAWQAPP QALRGVRVLD FSHVIAGPFA TFQLARMGAE VIKVERPGGG DVMRRSGSGA
HAFTALNAGK QARAIDLATP PGRAEALDLA RQADLMVDNY RPGVLERHGL GYEQVKAINP
RIVYCAISGY GRSDPALAAR GAYDHVVQGL TGMAMLAGQE CDPPIKVGFP VIDAATGLVG
ALAMMAALRE RDQTGHGSFL DVSMWASALQ LMYPFACDVL STGQEIARVG NKGFSGSPAA
DMFACRDGWL ALGANTPQHI AALMQVLGVD PQRYAPLLDA GSGKGPAFAR ARDPAAFREL
LAEQLAGHPA AELEQRLNDA GVPAARVRSL REFTQQAVDT GLLQPLVLGA GEERAVTPGL
GWRVAR
|
|---|
| |