Gene Veis_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0204 
Symbol 
ID4694481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp222996 
End bp224153 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content68% 
IMG OID639847989 
ProductFAD dependent oxidoreductase 
Protein accessionYP_995014 
Protein GI121607207 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.338423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.590226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCA CGGCACAGCG CAAGGAGGCG GACATCGCCG TCATCGGCGG CGGGGTGGTT 
GGCGCCGCGC TGGCCTTGGG CCTGGCCCGC TGCGGTGCGG TGGTCACCGT GCTGGACGGG
GGCGATGGCG CCTTGTGCGC CTCGGGCGGC AATTTTGCGC TGATCTGGGT GCAGTCCAAG
GGCCTGGGCA TGCCCGAGTA CGCCCTGTGG TCACGCCGTT CGGCGCAGGA CTGGCATGGC
CTGGCGGCCC TGTTGCAGGA CGAGGCCGGT ATCGATGTCG CCCATAGCCA GCCCGGCGGC
TTCACGCCTT GCCTGTCGGA GGCGGAACTG GAAAAGCGCG CCACCGCGAT ACAGCGGCTG
TACCGCCAAC CGGGCCTTGC CGACTTCCGC TACGAGGTTC TCGACCATGC CGAGACCCGG
CGGCGATTGC CCGATATCAG CAAACATGTG GTCGGTGCCA TCTACAGCCC GCTGGACGGT
CATGTGAATT CGCTCCGGCT CTGGCGCGCG CTGCGCGCGG CCGGTGCGCG CCGTGGCATC
GACTACCGTG CCAGCCATGT GGTCGGGTCG ATCAGGCCCC GTGACGGGGG CTTTCGCATC
GGTTTTCACT CCGGCTTTCA CCGTCCCGGG CACTGGGGCG AGATCGACGC CGGCCGGGTG
GTGCTCGCTG CCGGTCTGGG CAATGCGCGG CTTGCGCCCA TGGTCGGTCT GGCGGCGCCG
CTCCAGCCGC GCAAGGGCCA GATCATCGTC ACCGAAAAAA CCGCCGCCTT CCTGCACCAC
CCGATGGCGA GCCTGCGCCA GACCGACGAG GGCGGCATCA TGATCGGCGA CAGCCAGGAG
GATTGTGGCT TCGATACCGG CGTCGGCCAG TCCGTGATCG CGGTCATGGC CGAGCGCGCG
GTGCGCACCT TTGCGCGTCT GGCCGCTTTG CATGTCGTGC GCAGTTGGTC GGCGCTGCGC
GTGATGAGCC CGGACGGCTT TCCGATCTAT CAGCAGTCGC ACAGCCATCC CGGCGCCTTC
GTCGTCACCT GCCATTCCGG CGTGACGCTG GCCGCCAACC ATGTACTGAC GCTCGCCCCG
GCCATCTTCG CCGGCCAACT GCCCGAGTCG GTGGCGCGCT TTTCCGCACG GAGGTTCGAT
GTTCCGCCCC ATGTTTGA
 
Protein sequence
MTSTAQRKEA DIAVIGGGVV GAALALGLAR CGAVVTVLDG GDGALCASGG NFALIWVQSK 
GLGMPEYALW SRRSAQDWHG LAALLQDEAG IDVAHSQPGG FTPCLSEAEL EKRATAIQRL
YRQPGLADFR YEVLDHAETR RRLPDISKHV VGAIYSPLDG HVNSLRLWRA LRAAGARRGI
DYRASHVVGS IRPRDGGFRI GFHSGFHRPG HWGEIDAGRV VLAAGLGNAR LAPMVGLAAP
LQPRKGQIIV TEKTAAFLHH PMASLRQTDE GGIMIGDSQE DCGFDTGVGQ SVIAVMAERA
VRTFARLAAL HVVRSWSALR VMSPDGFPIY QQSHSHPGAF VVTCHSGVTL AANHVLTLAP
AIFAGQLPES VARFSARRFD VPPHV