Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0199 |
Symbol | |
ID | 4690862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 218148 |
End bp | 219041 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639847984 |
Product | LysR family transcriptional regulator |
Protein accession | YP_995009 |
Protein GI | 121607202 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.493239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAATC CGCGCCAGAT CGAGGCCTTC CGCACCGTCA TCATCATGGG CGGGGTCACT GCCGCAGCCC AGGCGCTGAG CATCTCCCAG CCTGCGGTGA CGCGACTGAT CCATGACCTG CAATACGCAC TCGGGCTCAA GCTCTTCGTC AAGCGCGGCA CGAGGCTGGT GCCGACGAAC GAGGCGCTAT CGCTTTTTCG CGAGGTCGAG CGCCAATTCG TTGGCCTGGA GCGCATACAG GCCGCAGCCC TGAGCCTGCG CGAGCGGCGC ATGGGTACGC TGCGCATCGC GGCCTTGCCG GCGTTCAATG TCGGCTTCCT GCCTCGGCTC GTGAGCCGCT ACCTTCAGCA CAAGCCCGGC CTGAATGTCA CGGTCTACGG CAGTAGCTCA TCACAGGTAG CGGACTGGGT GGTCTCGGGC TTTTGCGAAC TTGGCTTCGT CCAACTGCCG CTGGATTTTC CGAGCCTCGA TGTCGAGCCC CTGCCGCAGG CCACGGCGGT CGCGGTGCTG CCCCAAGACC ACCGGCTTGC AGCCCGATCG GTTCTTGGGC CGCGTGATTT CGCCGGCGAG TCTTTCGTCT CGCTGGAGCA GATGACGCAA CTGCGCTATC AGATCGACGC GCTCTTCGCG TCCGAACGCA TCACGCGCGA AGTGCGCATC GAAACACCGC TATCGATGAT CGCCTGCGCA CTGGTCGCCG CCGGAGCCGG CGTCAGCATC GTCGATCCGT TCACAGCGGC CGAATACTGC GGGCGCGGCG TCGTGGTCCG GCCCTTTCAC CCCGCCATCT TGTTCGACAT CGCCGTGATC TGGGCCGCAG GCCGGTGCAG ATCCGCACTG GCACAGGACT TCGCCCACCA GGTGCGCGCG GCGGTCATCG GGCAGGGCCG ATGA
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Protein sequence | MLNPRQIEAF RTVIIMGGVT AAAQALSISQ PAVTRLIHDL QYALGLKLFV KRGTRLVPTN EALSLFREVE RQFVGLERIQ AAALSLRERR MGTLRIAALP AFNVGFLPRL VSRYLQHKPG LNVTVYGSSS SQVADWVVSG FCELGFVQLP LDFPSLDVEP LPQATAVAVL PQDHRLAARS VLGPRDFAGE SFVSLEQMTQ LRYQIDALFA SERITREVRI ETPLSMIACA LVAAGAGVSI VDPFTAAEYC GRGVVVRPFH PAILFDIAVI WAAGRCRSAL AQDFAHQVRA AVIGQGR
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