Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0187 |
Symbol | |
ID | 4692634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 206638 |
End bp | 207399 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639847972 |
Product | extracellular solute-binding protein |
Protein accession | YP_994997 |
Protein GI | 121607190 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.056665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCG CTTCTCGCCT CGCCGCCTTG CTGCTGGCCA CGCTGACCAT GGCCTGCGGT GGCCAGGCAT CGGCCCAGGC CGTGCTCAAG GTCGGCTCCA CGCCCACCGG CAACCCCTTC ACCTTTCTCG ACACCAAGAC CAACACCATC GACGGCCTCA TGGCGGACAT CGTCAAGGCC GTCGGCAAGA CCTCGGGCTT TGCGGTGCAG ATCGAGCCGA TGCAGTTCTC GGCGCTGATC GGCTCGCTCA CCTCCGGGCG CATCGACCTG ATCTCGGCCG CGATGTTCAT CACGCCGGTG CGCCAGCAGG TGGTGGACTT CTCGCAGCCC ATCTACAGCT ACGGCGAAGG CATCGTGGTG CCGGTGAAAG ACGGCACCGC CTACCGCAGT TTCTCCGAGT TCAAGGGCAA GCGCATGGGC GTGCAGGTGG GCACGGCCTT TGTCGAGCCG CTGCACAAGC TCGGCATCTT CAGCGAGGTC AAGCTCTACG ACACCACGGC CGACCTGATG CGCGACGCCA ATGCCGGGCG CATCGACGCG GGTGTGCTCG ACTACCCGAT CGCGGCCTAT GCGATTTCCA GGAACCTGTT CCCGAACCTG CGCATGGCCA CGACCTACCA GCCGACCATG GTCAACGACA TCGGCATCGC CACGCGCAAG GGCGATACCG AAACCATGGC CAAGGTGAAC GCTGCGCTGA CCAAGCTCAA GGCCGACGGC AGCATCGACG CGATCCTCAA GAAGTGGGGC CTGAACCACT GA
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Protein sequence | MKPASRLAAL LLATLTMACG GQASAQAVLK VGSTPTGNPF TFLDTKTNTI DGLMADIVKA VGKTSGFAVQ IEPMQFSALI GSLTSGRIDL ISAAMFITPV RQQVVDFSQP IYSYGEGIVV PVKDGTAYRS FSEFKGKRMG VQVGTAFVEP LHKLGIFSEV KLYDTTADLM RDANAGRIDA GVLDYPIAAY AISRNLFPNL RMATTYQPTM VNDIGIATRK GDTETMAKVN AALTKLKADG SIDAILKKWG LNH
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