Gene Veis_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0187 
Symbol 
ID4692634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp206638 
End bp207399 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content64% 
IMG OID639847972 
Productextracellular solute-binding protein 
Protein accessionYP_994997 
Protein GI121607190 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.056665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCG CTTCTCGCCT CGCCGCCTTG CTGCTGGCCA CGCTGACCAT GGCCTGCGGT 
GGCCAGGCAT CGGCCCAGGC CGTGCTCAAG GTCGGCTCCA CGCCCACCGG CAACCCCTTC
ACCTTTCTCG ACACCAAGAC CAACACCATC GACGGCCTCA TGGCGGACAT CGTCAAGGCC
GTCGGCAAGA CCTCGGGCTT TGCGGTGCAG ATCGAGCCGA TGCAGTTCTC GGCGCTGATC
GGCTCGCTCA CCTCCGGGCG CATCGACCTG ATCTCGGCCG CGATGTTCAT CACGCCGGTG
CGCCAGCAGG TGGTGGACTT CTCGCAGCCC ATCTACAGCT ACGGCGAAGG CATCGTGGTG
CCGGTGAAAG ACGGCACCGC CTACCGCAGT TTCTCCGAGT TCAAGGGCAA GCGCATGGGC
GTGCAGGTGG GCACGGCCTT TGTCGAGCCG CTGCACAAGC TCGGCATCTT CAGCGAGGTC
AAGCTCTACG ACACCACGGC CGACCTGATG CGCGACGCCA ATGCCGGGCG CATCGACGCG
GGTGTGCTCG ACTACCCGAT CGCGGCCTAT GCGATTTCCA GGAACCTGTT CCCGAACCTG
CGCATGGCCA CGACCTACCA GCCGACCATG GTCAACGACA TCGGCATCGC CACGCGCAAG
GGCGATACCG AAACCATGGC CAAGGTGAAC GCTGCGCTGA CCAAGCTCAA GGCCGACGGC
AGCATCGACG CGATCCTCAA GAAGTGGGGC CTGAACCACT GA
 
Protein sequence
MKPASRLAAL LLATLTMACG GQASAQAVLK VGSTPTGNPF TFLDTKTNTI DGLMADIVKA 
VGKTSGFAVQ IEPMQFSALI GSLTSGRIDL ISAAMFITPV RQQVVDFSQP IYSYGEGIVV
PVKDGTAYRS FSEFKGKRMG VQVGTAFVEP LHKLGIFSEV KLYDTTADLM RDANAGRIDA
GVLDYPIAAY AISRNLFPNL RMATTYQPTM VNDIGIATRK GDTETMAKVN AALTKLKADG
SIDAILKKWG LNH