Gene Veis_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0153 
Symbol 
ID4692246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp172195 
End bp172740 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content70% 
IMG OID639847938 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 
Protein accessionYP_994963 
Protein GI121607156 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCGG CCCTGCAGAT CGACCCCGCC TTGCTGCTGC GCGCCCAAGG CCTACGCGTG 
GTGTTTTTCG ATGTCGACGG CGTGCTGACC GATGGCGGCC TGTACTTCGG CGCATCGGGC
GAGACCCTCA AGCGCTTCAA CACCCTGGAC GGCCAGGGTC TGACGCTGCT GCAAAAAGCC
GGCATCACCC CGGCCGTGAT CACCGGGCGC GACAGTGCGC CGCTGCGCCT GCGCCTGCAA
GCCCTGGGCG TCCAACATGC CGCGTTCGGC GTCGCGGACA AGCGCCCGGC AGCCGAGCAG
ATATTGACCA CGCTCGGTCT GACCTGGTCC CAGGCCGCCG CGATGGGCGA CGACTGGCCC
GATCTGCCGC TGCTGCGCCG CAGCGCGTTC GCCTGCGCGC CCGCCAATGC ACAGATCGAA
GTGCGCCACG CCGCCCACTT CGTCACCCGG GCCTGCGGCG GCGACGGCGC AGCGCGCGAA
CTGTGCGACC TGCTGCTCGT GGCCGCCGGC CGCTATGCGG CATTGCTGGC GGACTTTGAC
GCATGA
 
Protein sequence
MAPALQIDPA LLLRAQGLRV VFFDVDGVLT DGGLYFGASG ETLKRFNTLD GQGLTLLQKA 
GITPAVITGR DSAPLRLRLQ ALGVQHAAFG VADKRPAAEQ ILTTLGLTWS QAAAMGDDWP
DLPLLRRSAF ACAPANAQIE VRHAAHFVTR ACGGDGAARE LCDLLLVAAG RYAALLADFD
A