| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0117 |
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| Symbol | |
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| ID | 4693782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 142797 |
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| End bp | 143639 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639847903 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_994928 |
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| Protein GI | 121607121 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAC AACGCACCCA TGCCGAACCG GCCAGCAGCA GTCTGGCCGG CCGCGTCGCC
ATCGTGACGG GCGCTGGCTC GCGCAGTTCG GAGATCGGCA ATGGCCGTGC CGCTGCCATC
TTGCTGGCGC GTCGTGGCGC GCAAGTGCTG CTGCTCGATG CCCGGCTCGA CGCGGCCCGC
GAGACCGAGC GAATGATTGC CGACGAAGGC GGCAGCGCCA TCTGCGCGCA GATCGATGTC
GCCGAGGCCG AACCCTGCCG CCAGGCCGTT GCCATTGCCG TGCAAGCCTG GGGCCGTGTC
GACATTCTGG TCAATAACGT CGGCATCGGC GGGCCGGCCG GCAACGCCGT CGATTTGGAC
ATCGCGCAAT GGGAGCGGGC GCTGCGCGTG AATGTCACCT CGATGATGCT GATGGCCAGG
TACGCGATCC CGGAGATGCG CAAGCTCGGC GCCGGCGCCA TCGTGAACAT CGCCTCCATT
GCCGGGCTGA TCGGCGGCAC GCCGGCGCTG CTGTACCCCA CCTCCAAGGG CGCGGTGATC
AATATGACCC GCGCGATGGC GGCGCACCAT GGGCGCGAAG GCATTCGCGT CAACTGCGTT
GCGCCGGGCA TGGTCTACAC GCCGATGGTT GCCGACCGGA TGACGCCCGA GGTGCGCGAG
CAGCGGCGCA AGCGCTCGCT GTTGCAGACC GAGGGCTCGG GCTGGGATGT GGGCCAGGCC
GTGGCCTACC TGGCCAGCGA CGAAGCGCGC TGGGTCACGG GCGTGATCTT GCCGGTGGAT
GCGGGCACCA CCGCCGGCAA TGCCCCGTCG CCCGGCCTGA AGCCCGATAG CTCCGGGGGC
TGA
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| Protein sequence | MNQQRTHAEP ASSSLAGRVA IVTGAGSRSS EIGNGRAAAI LLARRGAQVL LLDARLDAAR
ETERMIADEG GSAICAQIDV AEAEPCRQAV AIAVQAWGRV DILVNNVGIG GPAGNAVDLD
IAQWERALRV NVTSMMLMAR YAIPEMRKLG AGAIVNIASI AGLIGGTPAL LYPTSKGAVI
NMTRAMAAHH GREGIRVNCV APGMVYTPMV ADRMTPEVRE QRRKRSLLQT EGSGWDVGQA
VAYLASDEAR WVTGVILPVD AGTTAGNAPS PGLKPDSSGG
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