Gene Veis_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0116 
Symbol 
ID4692618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp141324 
End bp142244 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID639847902 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_994927 
Protein GI121607120 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.916546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGATCG TGCTTGCGCT GCTGAGCGTG GCCACCTTTT CGATGCTGGA ACTGCTGCCC 
GGCTCGGTGG TCGATGCGAT GCTCAGCGAC AACGCCCGCC CCGAGGAGAT CGCGCGCCTG
CAGCATGCGC TGGGGCTGGA CCTGCCGATG CACCTGCGCT TTCTGGGCTG GCTCGGCAAC
GCACTGCAGG GTGACCTGGG CCGGTCGCCG CTGAGCGGTG AATCGGTCAG CGCCGCCATC
ACGCACCGGC TGCCGGTGTC GATCCTGCTG ATGCTGCTGG CGCAGGTGTT GGCGCTGCTG
ATCGCGCTGC CGCTGGGCAT CTGGGCTGGC AGCAATGCGG GCCGCCGGGT CGACCGCTGG
CTCTCGGGCG GCGCCTTCGG CGTGCTGGCG GTGCCGCATT TCGTGCTGGG GCTGCTGCTG
ATCTTGCTGT TCGCCATCTG GCTGCGCTGG TTTCCTGCCA CCGGCTATGT GCCGTTCGGC
GCCGAGCCGC TGGCCAGCAT CCACTCGCTG GCCCTGCCCG CAGCGACGCT GGCGCTGGTG
GAGGCGCCGA TCTACCTGCG CCTGCTGCGC AGCGACATTG CCAGCACCTT GCGCGCGCCA
TACATCACCG TGGCGCGCGC CAAGGGCCTG TCGGAGCGCC AGATACTGCT CCGCCACGCG
CTGCGGCCCT CGTCGTTCAG CCTGATCACC GTGCTGGGCA TCAATGTCGG CCATCTGATC
GGCGGCGCGG TGATCATCGA GACGCTGTTC GCGTTGCCCG GTCTGGGCCG GCTGTTGATC
GAGGCCATCA CGCAGCGCGA CTTCGTTACC TTGCAGGGCC TGGTGCTGTT CATCGGCGTG
GCCTTCGTGG CTGTCAACCT GGTCGTCGAC GCGGTCTACG CGCTGCTCGA CCCCCGGGTC
GGGGTGCGAC ATGCGCGCTG A
 
Protein sequence
MLIVLALLSV ATFSMLELLP GSVVDAMLSD NARPEEIARL QHALGLDLPM HLRFLGWLGN 
ALQGDLGRSP LSGESVSAAI THRLPVSILL MLLAQVLALL IALPLGIWAG SNAGRRVDRW
LSGGAFGVLA VPHFVLGLLL ILLFAIWLRW FPATGYVPFG AEPLASIHSL ALPAATLALV
EAPIYLRLLR SDIASTLRAP YITVARAKGL SERQILLRHA LRPSSFSLIT VLGINVGHLI
GGAVIIETLF ALPGLGRLLI EAITQRDFVT LQGLVLFIGV AFVAVNLVVD AVYALLDPRV
GVRHAR