Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0111 |
Symbol | |
ID | 4691424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 136265 |
End bp | 136789 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639847897 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_994922 |
Protein GI | 121607115 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.75447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA TTCCCTACTA CGACCTGAGC CAGGCGCCCG AGTCCTACAC CCGGCTGATC GCGGCGCGGC CGCCGCTGAA CCTCTATCGG ATGCTGGCGC ATGCGGGCAA GACGGCCGAG GGCTTTCTGG CGCTGGGCAG TGCCATCTTG CGCGAGAACA CGCTCGACGC GAAGCTGCGC GAGATCGCCA TCTTGCGCAC CGGCATCCTG TGCGGCGCCA GCTACGAGGT GCACCAGCAC CGGCGCGTGG CACGCCGCGT CGGACTGTCC GACGACAAGA TCGACGCGCT CGGCAAGGAC GCCGACCGCT CTGCGCTCGA TGCCACCGAG ACGCTGGTGC TGGAGTTCAC CGACCAGGTC GTGCTGCATG TGAAGGCCCC TGACGCGATG TTCGAGGCGC TGTGCGCGCG GCTGCCGCAT GGACAGGTCG CCGAGTTGGT GCTGGTCATC GGCTTTTACA TGCTGGTCAG CCGCTTTCTG GAGAACTTCG AGGTCGATAT CGAGCCGCCG GGGGCCGTCG GGTAG
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Protein sequence | MARIPYYDLS QAPESYTRLI AARPPLNLYR MLAHAGKTAE GFLALGSAIL RENTLDAKLR EIAILRTGIL CGASYEVHQH RRVARRVGLS DDKIDALGKD ADRSALDATE TLVLEFTDQV VLHVKAPDAM FEALCARLPH GQVAELVLVI GFYMLVSRFL ENFEVDIEPP GAVG
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