Gene Veis_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0111 
Symbol 
ID4691424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp136265 
End bp136789 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content67% 
IMG OID639847897 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_994922 
Protein GI121607115 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.75447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA TTCCCTACTA CGACCTGAGC CAGGCGCCCG AGTCCTACAC CCGGCTGATC 
GCGGCGCGGC CGCCGCTGAA CCTCTATCGG ATGCTGGCGC ATGCGGGCAA GACGGCCGAG
GGCTTTCTGG CGCTGGGCAG TGCCATCTTG CGCGAGAACA CGCTCGACGC GAAGCTGCGC
GAGATCGCCA TCTTGCGCAC CGGCATCCTG TGCGGCGCCA GCTACGAGGT GCACCAGCAC
CGGCGCGTGG CACGCCGCGT CGGACTGTCC GACGACAAGA TCGACGCGCT CGGCAAGGAC
GCCGACCGCT CTGCGCTCGA TGCCACCGAG ACGCTGGTGC TGGAGTTCAC CGACCAGGTC
GTGCTGCATG TGAAGGCCCC TGACGCGATG TTCGAGGCGC TGTGCGCGCG GCTGCCGCAT
GGACAGGTCG CCGAGTTGGT GCTGGTCATC GGCTTTTACA TGCTGGTCAG CCGCTTTCTG
GAGAACTTCG AGGTCGATAT CGAGCCGCCG GGGGCCGTCG GGTAG
 
Protein sequence
MARIPYYDLS QAPESYTRLI AARPPLNLYR MLAHAGKTAE GFLALGSAIL RENTLDAKLR 
EIAILRTGIL CGASYEVHQH RRVARRVGLS DDKIDALGKD ADRSALDATE TLVLEFTDQV
VLHVKAPDAM FEALCARLPH GQVAELVLVI GFYMLVSRFL ENFEVDIEPP GAVG