Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0085 |
Symbol | |
ID | 4694593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 101730 |
End bp | 103292 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639847871 |
Product | pseudouridine synthase |
Protein accession | YP_994896 |
Protein GI | 121607089 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.300201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA CGACCCCAGA CACTCCGGCA GCCGCTGCGC AGCCTGGCAG TGCCCCCGCG CACGCAGCGC GCGGCCAGGA AACAACGACG AGCACAGCGC GCGGCCAGGA AACAACGACG AGCGCAGCGC AAGGCCAGGA AACGACACGC ACGGCGCCCG GCCAGGAAAC GGCATGTGCA GCGCAAGGCC GGGAAACGCA CACGGCGCAC GACCCGCCAG CGGACACAGC CGCCACCCGG CAACAAGCCG GGCCGCCGCT GGCCGCGGTC GACGGGCCGG CCGAGCCAAC GGCCGCCAGC GCAGAGGCTG GCGCGCAACG CGAGCGTCAC CATCCGGCCG AACCCGGTGC CTCCAGGGGC AGGCCGCGTC CCCCAGGCCC GCGCAGGCCG GCGGCGATTG CGGTCGAGGG CTATCGGCTG GCCGATGTGG TATCGGGCCG GTTCGATGCC GACGATGCCG CGAGCGACCT GCCGCCCCCC AAGCGGGTGC TGCTGCCGCA GGTGGAAACG CCCAAACTGC ACAAGGTGCT GGCCCAGGCC GGGCTAGGCT CGCGGCTGGA GATGGAGCAG CTGATTCTGG AGGGGCGCAT CTCGGTGAAC AACGAGCCGG CGCATATCGG GCAGCGGATA CAGTTCGGCG ACCAGGTCAA GGTCAACGGC AAGCCGATTC GCTACCGCAT CGATCCGCCA CCGGCGCGTG TGATCGCCTA CCACAAGCCG GTCGGCGAGG TCGTGTCGCA CGACGACCCG CACAACCGGC CGACCGTCTT TCGCAGGCTG CCGCGCCTGG TGCAGGGCAA GTGGCAATCG GTGGGGCGGC TGGACCTGAA CACCGAAGGC TTGCTGCTGC TGACCAGTTC CGGCGAACTG GCCAACCAGT TGATGCACCC GCGCTTCGGA CTGGAGCGCG AGTACGCGGT GCGGGTCCTG GGCGCGCTGA GCAACGAAGA AAAGCAAAAA CTGCTGGACG GCGTGCGGCT CGATGACGGC ATCGCATCTT TCGGCACCAT CGAAGATGGC GGCGGGGAAG GCGCCAACTG CTGGTACCGG GTCACCATTG CCGAAGGGCG CAACCGTGAA GTGCGCCGCA TGTTGGAAGC GGTCGGCCAT GCCGTCAGCC GCCTGATCCG CATCCGTTAC GGCGCGATGG TATTGCCGCG CGGCCTCAAG CGCGGGACCT GGCTGGAGCT CGACGAGCGC GACATCCGGG CACTGGCGCA GGCCGCTGGC GCGCGCGCGC CAGCACTGTC CACGCGCACG CCGACGGATG CGCGCGCGGG CAAGCAGCGC GAGCGCAGCG GCCCCCCGAT GGGCAACGGG CCGCGACGCG GCCGGTCGCC GCAGGGGCCT GCCGCCGGCG CGCGCGCGCA GAACCCGCGC CGCGATGGCG GCGGGCAGGG CGTGGGGGCC GGTGGCAACC ATGCCGGCCC GCGCGCAGCG GCCCAACCCG ACCCGATGCA GACCAGCGTG GGTTATATCG GTGGCGACAG CCTGTCCAGG CTGCGCCAGA GCAAACGCCG CCCGGCAGGC GCGGGGCCTC GGCGCGGAGG CGGCGGGCGC TGA
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Protein sequence | MNDTTPDTPA AAAQPGSAPA HAARGQETTT STARGQETTT SAAQGQETTR TAPGQETACA AQGRETHTAH DPPADTAATR QQAGPPLAAV DGPAEPTAAS AEAGAQRERH HPAEPGASRG RPRPPGPRRP AAIAVEGYRL ADVVSGRFDA DDAASDLPPP KRVLLPQVET PKLHKVLAQA GLGSRLEMEQ LILEGRISVN NEPAHIGQRI QFGDQVKVNG KPIRYRIDPP PARVIAYHKP VGEVVSHDDP HNRPTVFRRL PRLVQGKWQS VGRLDLNTEG LLLLTSSGEL ANQLMHPRFG LEREYAVRVL GALSNEEKQK LLDGVRLDDG IASFGTIEDG GGEGANCWYR VTIAEGRNRE VRRMLEAVGH AVSRLIRIRY GAMVLPRGLK RGTWLELDER DIRALAQAAG ARAPALSTRT PTDARAGKQR ERSGPPMGNG PRRGRSPQGP AAGARAQNPR RDGGGQGVGA GGNHAGPRAA AQPDPMQTSV GYIGGDSLSR LRQSKRRPAG AGPRRGGGGR
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