Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0066 |
Symbol | |
ID | 4691898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 81212 |
End bp | 83095 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639847852 |
Product | thiamine pyrophosphate binding domain-containing protein |
Protein accession | YP_994877 |
Protein GI | 121607070 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3962] Acetolactate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.354472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAA GCACGAGACT GACGGTCAGC CAGGCGCTGG TGCGCTACCT GGCTGCGCTG AAGGCCGAGG TCATACAGCC CGACGGCCGC ACCGACATCC TGCCCTACTG CGCCGGCGTG TTCGCGATCT TCGGCCACGG CAACGTGGCC GGCCTGGGCG AGGCGCTACA GGCCGAAAAA GACCGGCTGC CCACGCTGCG CGCGCACACC GAGCAGGGCA TGGCCAACGC CGCCGTGGCC TTTGCCAAAG CCCATTTCCG CCAGCGCATC ATGGCCGTGA CCTCCAGCAT CGGCCCGGGC GCGACCAATA TGCTGACCTC GGCAGCGCTG GCGCATGTGG CGCGGCTGCC GCTGCTGCTG CTGCCCGCCG ATGTCTTTGT CTCGCGCCTG CCCGACCCCG TGCTGCAACA GGTCGAGAGC TTCGGGCAGG GCGATGTCAG CGCCAACGAC TGCTTTCGCC CGGTGACGCG CTACTTCGAC CGCATCATGG CGCCCGAGCA ACTGCTGGTG GCCCTGCCGC GTGCGCTGCA GGTGCTGACC GACCCGGCGC AATGCGGCCC GGTATGTCTG GCGCTGCCGC AGGATGTGCA GACCTTCGCC CATGACTGGC CCGAAGACTT TTTCCACCCG GCACTGATCC GCATGCGCCG CCCGCCGGCC GACGCGCAAG AACTGGCCGC CGCCTGCGCG CTGCTGAAGT CGGCCAAGAG GCCGCTGATC GTGGCCGGCG GCGGCGTGCT CTACAGCCAG GCCTGGGACG CGCTGCGCAG CTTTGCGCAA ACCCATGGCG TGCCGGTGAG CGAAACGCAG GCCGGCAAAA GCAGCCTGGC CTGGGACCAC CCGCTGAACC TGGGCGCCAT CGGCGTCAGT GGCTCGCCCG CAGCCAACGG CGCCGCCGAG CAATGCGATC TGCTGTTCGC CATCGGCACG CGGCTGCAGG ACTTCACCAC CGGCTCGCAT GCGCTGTACC CGCAGGCCAG GTTGCTGAGC CTGAACATCC AGCCGCTGGA TGCGGCCAAA AAGCGCGGCC AGCCGCTGCT CGCCGATGTC CGCACCGGAT TGGGCCAGCT CACGGCCGCC CTGGCCGGCT GGCGTGCCGA CCCGGACTGG AGCGCCAGTT GCCGCCACCA GGCCGCCGCC TGGGCGACGC GCGTGACCGA ACTGACCACC CATGACCCCG GCGACGCGCT GCCCTACGAC GCCGAGGTGA TAGGCGCAGT GCGCGAATCG GCCACCGATG TCGGGCTCGA CAGCGCAGAC AACGACATCG TGGTCTGCGC CGCCGGCACG CTGCCGGCCG AGTTGCACAA GCTCTGGCGC AGCGCATTGC CGGGCAACTA CCACATGGAC TATGCCTACT CCTGCATGGG CTACGAAGTG GCGGGCGGCC TGGGCGTGAA ACTGGCGCGG CCCGAGCGCG AGGTCATCGT CATCGTCGGC GACGGCTCGT ACATGATGCT CAACTCCGAG TTGGCCAGTT CGGTGCTGCT CGGCCGCAAG ATCATCGTCG TCATCCTGGA CAACCGCGGC TACGGCTGCA TCGAGCGGCT ACAGATCGGC AGCGGCGGCG CGAGCTTCAA CAACATGCTC GACGACTGCG TGCCCGAAGG CGGCGCGCGC TCGGCGATCG ACTTTGCCAT GCATGGCCGC TCCATGGGCG CCGACGCCGT GCATGTGCGC GACACGGAAG AACTGCGCCG CGAGCTGCAC CGCGCCCGGG CGGCCAGCAA AAGCCAGGTG CTGGTGATAA ACACCACGCA CCAGCGCACC ACCGGCGACG GCGGCGCCTG GTGGGAGGTG GCGGTGCCCG AGGTCTCCGC CCGGGCCGAG GTGGCCGCAG CGCACCGCGC CTACCTGCAA GCCAAAACCC GGCAGCGCCG CTGA
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Protein sequence | MQASTRLTVS QALVRYLAAL KAEVIQPDGR TDILPYCAGV FAIFGHGNVA GLGEALQAEK DRLPTLRAHT EQGMANAAVA FAKAHFRQRI MAVTSSIGPG ATNMLTSAAL AHVARLPLLL LPADVFVSRL PDPVLQQVES FGQGDVSAND CFRPVTRYFD RIMAPEQLLV ALPRALQVLT DPAQCGPVCL ALPQDVQTFA HDWPEDFFHP ALIRMRRPPA DAQELAAACA LLKSAKRPLI VAGGGVLYSQ AWDALRSFAQ THGVPVSETQ AGKSSLAWDH PLNLGAIGVS GSPAANGAAE QCDLLFAIGT RLQDFTTGSH ALYPQARLLS LNIQPLDAAK KRGQPLLADV RTGLGQLTAA LAGWRADPDW SASCRHQAAA WATRVTELTT HDPGDALPYD AEVIGAVRES ATDVGLDSAD NDIVVCAAGT LPAELHKLWR SALPGNYHMD YAYSCMGYEV AGGLGVKLAR PEREVIVIVG DGSYMMLNSE LASSVLLGRK IIVVILDNRG YGCIERLQIG SGGASFNNML DDCVPEGGAR SAIDFAMHGR SMGADAVHVR DTEELRRELH RARAASKSQV LVINTTHQRT TGDGGAWWEV AVPEVSARAE VAAAHRAYLQ AKTRQRR
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