| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0043 |
|---|
| Symbol | |
|---|
| ID | 4690525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 54844 |
|---|
| End bp | 55770 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639847829 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_994854 |
|---|
| Protein GI | 121607047 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTAA AAATCGGCAT CAACCCCATT ACCTGGACGA ACGATGACAT GCCGGAACTC
GGCGGCGACA CGCCGCTGGA GGTGTGCCTG TCGGAAACCG CACAGGCCGG CTATCGCGGC
ACGGAGCTTG GCGGAAAGTT TCCGCGCAAC AGCCGCGCGC TGGCGGCGGT CTTGGCGCGC
CATGGGCTGG AACTGGTCTC CGGCTGGTAT GACGGCCGCA TTCTCGATCG GTCGGTCGAT
GAGGAATTTG CGGCTGCCCT GCCGCATCTG AGCTTGCTGC GCGCTGCGGG CGCTGCGCAT
GTCGTCTATG CCGATACATC GCGTGGACGT CATGGCGGCA TTTTCCAGCC GATCTCCAAG
CGCCCGAAAC TCCAGGCCGA TGAATGGGGG GCCTACGGCG CCAAAATCAC CGAACTGGCC
GAACGCATGG CCGATTTCGG CGTCGGGATG GCATTCCATC ACCATATGGG CACGATCGTC
GAAACGGACG CGGAAGTCGG CCTTTTGATG CGCCACAGCG GCAAGGCCGT TGGCTTGCTT
TTCGACACCG GCCATTGTCT TTTCTCCGGC GGTGATCCGG CCAGCCTGCT CGACCGTCAC
ATCGATCGCG TCGTCCATGT CCATTGCAAG GATGTCCGCC CGGCCATCTT GCAAAAGGCG
CGTTCGACGG ACATGAGCTT CATGGCCGCC GTGCTCGATG GCATCTTCAC CGTGCCGGGC
GATGGCGGCG TCGATTTCAC GGCACTGCTG ACGCAACTGG CACAGCGCGG CTATTGCGGC
TGGCTCGTCG TCGAGGCGGA ACAGGATCCG AAGAAAGCCA ATCCGCTGAC CTATGCGACG
ATGGGCTACC GGAATCTTGA GCGGATGGCC ATCGATGCCG GCCTGACCGT GCTCACGGGA
GTACCTTCGC GTTCGGCTAC GGTGTGA
|
|---|
| Protein sequence | MTVKIGINPI TWTNDDMPEL GGDTPLEVCL SETAQAGYRG TELGGKFPRN SRALAAVLAR
HGLELVSGWY DGRILDRSVD EEFAAALPHL SLLRAAGAAH VVYADTSRGR HGGIFQPISK
RPKLQADEWG AYGAKITELA ERMADFGVGM AFHHHMGTIV ETDAEVGLLM RHSGKAVGLL
FDTGHCLFSG GDPASLLDRH IDRVVHVHCK DVRPAILQKA RSTDMSFMAA VLDGIFTVPG
DGGVDFTALL TQLAQRGYCG WLVVEAEQDP KKANPLTYAT MGYRNLERMA IDAGLTVLTG
VPSRSATV
|
|---|
| |