Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0041 |
Symbol | |
ID | 4690291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 53068 |
End bp | 53577 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639847827 |
Product | preprotein translocase subunit SecB |
Protein accession | YP_994852 |
Protein GI | 121607045 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1952] Preprotein translocase subunit SecB |
TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.815394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCCGGC GGGTTTCGTT TTGCTGCAAC CCAAGCCAAG AGACTGTCAC CATGGCCGAC CAAGACAATC CCGTGTTCCA GATTCAGCGG GTCTACCTCA AAGACCTGTC GCTGGAACAG CCCAACTCGC CCGCCATCTT GTTGGAGCAA GAGCAGCCCA ATCTCGACAT ACAGCTTGGT GTGGAAGCCA CCCCGGTGGG CGAAGGCTTT TTTGAAGTGG CCGTGACCGC CACGGTGCAG ACCAAGATCA AGGACAAGAC CATGTTCCTG GTCGAGGCCA AGCAGGCCGC GATCTTCGAG ATCCGCAATG TGCCCGAGGA CCAGATGGGC CAGATCATGG GCGTCGTCTG CCCGCAGATC GTCTACCCCT ACCTGCGCGG CAATGTGGCC GACGTGATCA ACCGCGCCGG CTTCCCGCCG GTGCACCTGG GCGAGATCAA CTTCCAGGGC ATGTATGAGC AGCAGCAGGC GCAAGCTGCG GGCGCGGCTG CGCCGGTGAC CACGCAGTAA
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Protein sequence | MPRRVSFCCN PSQETVTMAD QDNPVFQIQR VYLKDLSLEQ PNSPAILLEQ EQPNLDIQLG VEATPVGEGF FEVAVTATVQ TKIKDKTMFL VEAKQAAIFE IRNVPEDQMG QIMGVVCPQI VYPYLRGNVA DVINRAGFPP VHLGEINFQG MYEQQQAQAA GAAAPVTTQ
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