Gene Veis_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0037 
Symbol 
ID4692877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp49114 
End bp51003 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content70% 
IMG OID639847823 
Productdihydroxy-acid dehydratase 
Protein accessionYP_994848 
Protein GI121607041 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase 
TIGRFAM ID[TIGR00110] dihydroxy-acid dehydratase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.93636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCCATCCATC ACCGCAGCAC GCCACCGCGC CGGATGAAGC CGCGCACGGC 
ATTGCCAAGG GGCTGCCCGA CTACGGCGAT CGGGGCTTTT CGCTGTTTTT GCGCCGGGCC
TTCATCAAGG GGGCGGGCTA TACCGACGCG GCGCTGGGGC GTCCGATCAT CGGCATCGCC
AACACGGCCA GCGCCTACAA CCCGTGCCAT GGCAATGCGC CGCAGCTCAT CGAGGCCGTC
AAGCGCGGCG TGCTGCTGGC CGGTGGCCTG CCGATGGATT TCCCGACGAT CTCGGTGCAC
GAGAGCTTCT CGCAGCCTAC GAGCATGTAC ACGCGCAACC TGATGTCCAT GGACACGGAA
GAGATGATCC GCGCCCAGCC CATGGATGCG GTGGTGCTGA TCGGCGGTTG CGACAAGACC
GTGCCGGCGC AGTTGATGGG CGCGGCATCG GCGGGCATCC CGGCGATTGC GCTGATCACG
GGGGCCATGC TGACCGGCGC GCACCGTTCG CAGCGCGTGG GGGCCTGCAC GGATTGCCGG
CGCTACTGGG CCCGGTTTCG CGCCGGGGAG ATCGATGCGC AGGAGATCGC CGACGTGAAC
CGGCAATTGG TCGCCAGCGT CGGCACCTGC TCGGTGATGG GCACCGCCAG CACCATGGCC
TGCATCGCCG AGGCGCTGGG CATGACGGTG CCCGGCGGCG CGTCGCCGCC GGCCGTGACG
GCCGACCGTA TCCGCGTGGC CGAGCAGACC GGCGCGCAGG CGGTCGCGAT GGCGCGCAGC
GGGCTGACGA TCGATAAGGT GCTCACTGCC CGGGCGTTCG AGAACGCGAT GCGGGTGTTG
CTGGCGATTG GCGGATCGAC CAACGCCATC GTGCACCTGA CCGCGATCGC GGGCCGCATG
GGCTATGACA TCGACCTCGA TGCATTCGAC CGCATGGGCC GGCAGACGCC GGTGCTGCTG
GACCTGAAAC CTTCGGGCGC GCATTACATG GAGGACTTCC ACCATGCCGG CGGCATGGCA
ACGCTGCTGC GCGAGCTCAA GCCCTTGCTG CATCTGGACG CGCTGACCGT GACCGGGCGC
ACCTTGGGCG AGGAGATCGA GCGGGCCGGG CCGGGCTTCG CGCAGCAGGT GGTTCGGCCG
CTGGAGCGCC CAATCTATCC GCAAGGCGGC ATCGCGGTGC TGCAGGGCAA TCTGGCGCCC
GGCGGGGCCA TCATCAAGCA ATCGACGGCC GACGCCGCGC TGATGGAGCA TGAGGGGCGG
GCGGTGGTGT TCGAGAATGC CGAGGATCTG GCGCGCCGCA TCGACAGCGA TGGGCTCGAC
GTGACGCAGG CGGACATTCT GGTGCTCAAG AACATCGGCC CCAAGGGCGC GCCGGGCATG
CCCGAGGCCG GCTACATCCC GATTCCGCGC AAACTGGCCC GCGCCGGGGT CAAGGACATC
GTGCGCATCT CGGACGGCCG CATGAGCGGC ACGGCTTTCG GCACCATCGT GCTGCATGTG
ACGCCCGAAG CGGCGGTGGG CGGCCCGCTG GCCCATGTGC GCAATGGCGA CCGCATTCGC
CTGTCGGTGC GCGAGCGCGC ATTGACGCTG CTGGTGGACG ACCAGGAACT GGCCCGGCGC
GCGAGCGCAC ACCCGGTCGT CGCGCCCCGG GCCGACCGGG GCTATCGCAA GCTGTTCTTG
CAGTCCGTGA CGCAGGCCGA CCAGGGCGTC GACTTCGACT TCCTGCGCGC GCCGGTGACA
CGCGCGAGGC TGCCTGCATC CGGTGCATGG CACGACGCTG CGTGCCCGCC CGCCCCGCCG
AGCCTGCCCG GCGCCATGCC TGAGGCCGGG CTGCGGGCGG CACGGACCAG CGCCGACCCG
CCGTCTGCAA TACCGCCGAC GGCGCCCTGA
 
Protein sequence
MTDTHPSPQH ATAPDEAAHG IAKGLPDYGD RGFSLFLRRA FIKGAGYTDA ALGRPIIGIA 
NTASAYNPCH GNAPQLIEAV KRGVLLAGGL PMDFPTISVH ESFSQPTSMY TRNLMSMDTE
EMIRAQPMDA VVLIGGCDKT VPAQLMGAAS AGIPAIALIT GAMLTGAHRS QRVGACTDCR
RYWARFRAGE IDAQEIADVN RQLVASVGTC SVMGTASTMA CIAEALGMTV PGGASPPAVT
ADRIRVAEQT GAQAVAMARS GLTIDKVLTA RAFENAMRVL LAIGGSTNAI VHLTAIAGRM
GYDIDLDAFD RMGRQTPVLL DLKPSGAHYM EDFHHAGGMA TLLRELKPLL HLDALTVTGR
TLGEEIERAG PGFAQQVVRP LERPIYPQGG IAVLQGNLAP GGAIIKQSTA DAALMEHEGR
AVVFENAEDL ARRIDSDGLD VTQADILVLK NIGPKGAPGM PEAGYIPIPR KLARAGVKDI
VRISDGRMSG TAFGTIVLHV TPEAAVGGPL AHVRNGDRIR LSVRERALTL LVDDQELARR
ASAHPVVAPR ADRGYRKLFL QSVTQADQGV DFDFLRAPVT RARLPASGAW HDAACPPAPP
SLPGAMPEAG LRAARTSADP PSAIPPTAP