Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0037 |
Symbol | |
ID | 4692877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 49114 |
End bp | 51003 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639847823 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_994848 |
Protein GI | 121607041 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.93636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CCCATCCATC ACCGCAGCAC GCCACCGCGC CGGATGAAGC CGCGCACGGC ATTGCCAAGG GGCTGCCCGA CTACGGCGAT CGGGGCTTTT CGCTGTTTTT GCGCCGGGCC TTCATCAAGG GGGCGGGCTA TACCGACGCG GCGCTGGGGC GTCCGATCAT CGGCATCGCC AACACGGCCA GCGCCTACAA CCCGTGCCAT GGCAATGCGC CGCAGCTCAT CGAGGCCGTC AAGCGCGGCG TGCTGCTGGC CGGTGGCCTG CCGATGGATT TCCCGACGAT CTCGGTGCAC GAGAGCTTCT CGCAGCCTAC GAGCATGTAC ACGCGCAACC TGATGTCCAT GGACACGGAA GAGATGATCC GCGCCCAGCC CATGGATGCG GTGGTGCTGA TCGGCGGTTG CGACAAGACC GTGCCGGCGC AGTTGATGGG CGCGGCATCG GCGGGCATCC CGGCGATTGC GCTGATCACG GGGGCCATGC TGACCGGCGC GCACCGTTCG CAGCGCGTGG GGGCCTGCAC GGATTGCCGG CGCTACTGGG CCCGGTTTCG CGCCGGGGAG ATCGATGCGC AGGAGATCGC CGACGTGAAC CGGCAATTGG TCGCCAGCGT CGGCACCTGC TCGGTGATGG GCACCGCCAG CACCATGGCC TGCATCGCCG AGGCGCTGGG CATGACGGTG CCCGGCGGCG CGTCGCCGCC GGCCGTGACG GCCGACCGTA TCCGCGTGGC CGAGCAGACC GGCGCGCAGG CGGTCGCGAT GGCGCGCAGC GGGCTGACGA TCGATAAGGT GCTCACTGCC CGGGCGTTCG AGAACGCGAT GCGGGTGTTG CTGGCGATTG GCGGATCGAC CAACGCCATC GTGCACCTGA CCGCGATCGC GGGCCGCATG GGCTATGACA TCGACCTCGA TGCATTCGAC CGCATGGGCC GGCAGACGCC GGTGCTGCTG GACCTGAAAC CTTCGGGCGC GCATTACATG GAGGACTTCC ACCATGCCGG CGGCATGGCA ACGCTGCTGC GCGAGCTCAA GCCCTTGCTG CATCTGGACG CGCTGACCGT GACCGGGCGC ACCTTGGGCG AGGAGATCGA GCGGGCCGGG CCGGGCTTCG CGCAGCAGGT GGTTCGGCCG CTGGAGCGCC CAATCTATCC GCAAGGCGGC ATCGCGGTGC TGCAGGGCAA TCTGGCGCCC GGCGGGGCCA TCATCAAGCA ATCGACGGCC GACGCCGCGC TGATGGAGCA TGAGGGGCGG GCGGTGGTGT TCGAGAATGC CGAGGATCTG GCGCGCCGCA TCGACAGCGA TGGGCTCGAC GTGACGCAGG CGGACATTCT GGTGCTCAAG AACATCGGCC CCAAGGGCGC GCCGGGCATG CCCGAGGCCG GCTACATCCC GATTCCGCGC AAACTGGCCC GCGCCGGGGT CAAGGACATC GTGCGCATCT CGGACGGCCG CATGAGCGGC ACGGCTTTCG GCACCATCGT GCTGCATGTG ACGCCCGAAG CGGCGGTGGG CGGCCCGCTG GCCCATGTGC GCAATGGCGA CCGCATTCGC CTGTCGGTGC GCGAGCGCGC ATTGACGCTG CTGGTGGACG ACCAGGAACT GGCCCGGCGC GCGAGCGCAC ACCCGGTCGT CGCGCCCCGG GCCGACCGGG GCTATCGCAA GCTGTTCTTG CAGTCCGTGA CGCAGGCCGA CCAGGGCGTC GACTTCGACT TCCTGCGCGC GCCGGTGACA CGCGCGAGGC TGCCTGCATC CGGTGCATGG CACGACGCTG CGTGCCCGCC CGCCCCGCCG AGCCTGCCCG GCGCCATGCC TGAGGCCGGG CTGCGGGCGG CACGGACCAG CGCCGACCCG CCGTCTGCAA TACCGCCGAC GGCGCCCTGA
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Protein sequence | MTDTHPSPQH ATAPDEAAHG IAKGLPDYGD RGFSLFLRRA FIKGAGYTDA ALGRPIIGIA NTASAYNPCH GNAPQLIEAV KRGVLLAGGL PMDFPTISVH ESFSQPTSMY TRNLMSMDTE EMIRAQPMDA VVLIGGCDKT VPAQLMGAAS AGIPAIALIT GAMLTGAHRS QRVGACTDCR RYWARFRAGE IDAQEIADVN RQLVASVGTC SVMGTASTMA CIAEALGMTV PGGASPPAVT ADRIRVAEQT GAQAVAMARS GLTIDKVLTA RAFENAMRVL LAIGGSTNAI VHLTAIAGRM GYDIDLDAFD RMGRQTPVLL DLKPSGAHYM EDFHHAGGMA TLLRELKPLL HLDALTVTGR TLGEEIERAG PGFAQQVVRP LERPIYPQGG IAVLQGNLAP GGAIIKQSTA DAALMEHEGR AVVFENAEDL ARRIDSDGLD VTQADILVLK NIGPKGAPGM PEAGYIPIPR KLARAGVKDI VRISDGRMSG TAFGTIVLHV TPEAAVGGPL AHVRNGDRIR LSVRERALTL LVDDQELARR ASAHPVVAPR ADRGYRKLFL QSVTQADQGV DFDFLRAPVT RARLPASGAW HDAACPPAPP SLPGAMPEAG LRAARTSADP PSAIPPTAP
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