Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0019 |
Symbol | |
ID | 4690491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 29755 |
End bp | 30297 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639847805 |
Product | pilus assembly protein, PilQ |
Protein accession | YP_994830 |
Protein GI | 121607023 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3168] Tfp pilus assembly protein PilP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGATT TTCGCATTCC GCTGCTGCTG ACGCTGCCGG TGGTGCTGAC GGCTTGTTCT CCCGGCGGCG AGGATGAATT GCGCCAATGG ATCATCGAGC AGCGCGCCAA CACCCGCGCC GGTGTCACAC CTTTGAGCGA GCCGAAAAAG TTCATTCCAG AGCTTTATAC CCAGGACGGG GTCATGGATC CGTTCGATCC ATTGAAACTG ACACGGGGCT CGGACGGCGA CACCACACAT GCGGCGGAAA ATGCAGCGCT GCTGGCCCCC GAGCTGGCGC GGCGCAAAGA GCCTTTGGAG GCATTTCCGT TGGACACCAT GGCCATGGTT GGCAGCCTGA ACAAAACGGG AACTCCGACC GCCTTGCTGC GGGTTGAGAA TCTGATTTAT CAGGTTCATG TGGGCAATTA TCTTGGGCAG AACTATGGGA AAGTCGTCCA GATCACCGAA AACTCGATTC AATTGCGCGA GATAGCACAG GATGCAGCCG GAGATTGGGT AGAACGCATG GCATCGCTCG ATCTGCAAGA GGGAAAAAAA TGA
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Protein sequence | MKDFRIPLLL TLPVVLTACS PGGEDELRQW IIEQRANTRA GVTPLSEPKK FIPELYTQDG VMDPFDPLKL TRGSDGDTTH AAENAALLAP ELARRKEPLE AFPLDTMAMV GSLNKTGTPT ALLRVENLIY QVHVGNYLGQ NYGKVVQITE NSIQLREIAQ DAAGDWVERM ASLDLQEGKK
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