| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0018 |
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| Symbol | |
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| ID | 4693439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 27620 |
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| End bp | 29758 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639847804 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_994829 |
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| Protein GI | 121607022 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.845155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA TCAGTAGCTT GTCCATGAAC TTCTGCCGTC CCGCCGCCAT CGGCATCACG
CTGGCGTTCC TGTCCCTGAC CGCGGTGGCA CAAGGCGCAA TCAGCGCGAT TGCCGGTAGC
GTGCAGGGTG GGGTCGAAAT CCTGAAAATA GACTTCACCG ACGCTTTGAC GGCGCCGCCC
ACGGGGTTTA CGATACAATC GCCGGCACGC ATTGCGCTTG ATTTTCCGGG CGTGACCAAC
GCCTCGGGAA AATCGGCGCA CACGGTGAAT CTTGGCAATT TGAAATCCAT CAACATCGTT
CAAGCCAGTG AGCGCTCGCG CGTGGTGCTG AACCTGAAGT CGCCGACATC CTATCATGTG
GATGTTCAGG GCAAGACGCT CATCCTGTCA TTGGCTCCCG TGGCCGGAGC CGCCCCGGTG
GCGGCCGCTC CGGTGGTGCC ATTTGCTGAA AATCAAAACA GCGACATATT GCCGCTGAAG
GATATCGATT TTCGCCGTGG CACCGATGGT TCCGGCCGGG TGATCGTGAC GCTGGCCAAC
AGCCAGGCCG GCGTCGATCT TCAGCAGCAA GCCAAAGGCA TTGCCGTCGA ATTCATGCGC
ACATCGCTGC CCGAAGGCTT GCGCCGGCGG CTGGATGTGA CCGATTTCGG CACCCCGGTG
CAGACCGTGA CCACGACGCA AACCGGCGAG CGCGTCCGCA TGCTGATCGA ATCCAGCGGC
GATTGGGAGC ACAGCGCCTA TCAGAGTGAC AACCAATTCG TGGTGGAGAT CCGCCAAAAG
AAAATCGATC AGAGCAAGCT CACGCAAGGC CCGGGGTATT CTGGCGAGAA ACTTTCGTTG
AACTTCCAGA ATATCGAAGT CAGGTCGTTG CTGCAGGTGA TCGCTGATTT CACGAATTTC
AATATCGTGA CCTCGGACAC CGTGACCGGG TCTTTGACCC TGCGGCTCAA GGACGTGCCT
TGGGACCAAG CCCTGCAGAT CATCCTCGAT GCCAGGGGCT TGGGCATGCG CAAAGCGGGC
TCGGTGCTGT GGGTGGCGCC CAAGGACGAA ATCGATGCCC GCACCCGAAA GGATTTTGAA
GTGGCCCAGG CGATACAGCG GCTCGAACCT TTGAGAACCC AGGCCTATCA ACTCAATTAC
GCCAAGGCTT CCGATATTCT CACCCAACTC AATGCCAGCG GTGGTGCCGG CGGCTCATCC
ACCCGCTTTC TCTCGGAGCG CGGGAGTGCG ATTGCCGAGC CCCGGACCAA CCAGTTGTTC
GTCACGGATA CCGCCAGCAA GCAGGAGGAG GTTCGGCAAC TGTTGGCGCG CCTGGATGTC
GCAGTCCGTC AGGTGATGAT CGAGGCGCGC ATCGTCGAAG CCCGTGATTC GTTTGGCCGT
TCGCTGGGTG TGCGTCTGGG TTCAACGGAT TTGAGTGCGA GCCGGAAGGG AACCGGTGGC
TACGGAATCG GTGGCAACAA ACGTGTTGCC TATGGCACCT CGTACAGCGA TGCGGTCAAG
GCCAGTGGTG CAAACGGATC CACTGCTCCC GATACCGGTG GAAATTTCGT CAACCTTCCC
GCCAGTCTTT CGAGCGTGAA TACGGTCGGC TCCTTTGCGC TTTCGATCTT CAACGCTGCG
ACGAACAAAT TCCTGACGCT GGAGCTGTCG GCGATGGAGG CCGATGGCAA GGGGCGCATC
GTGTCGAGCC CGCGCATCAT CACGGCGGAT CAGACCAAGG CATTGATCGA GCAAGGAACG
GAATACCCCT ATGCCGTCAC CGCCCCCAAC GGGGCGACCA CGCTGGCTTT CAAGAAAGCG
GTGCTGAAAC TCGAGGTCTC TCCGCAAATC ACCCCGGAAG GCAACATCAT TCTGGATCTG
GACGTGAGCA AGGACAGCCG TGGTGAAACC ACATCCCAAG GTGTTGCCAT CGATACCAAG
CACATCAAAA CACAGATCCT GATCGAGAAC GGCGGAACGG TGGTGATTGG CGGCATTTTC
GAGATGGAAG AAACGAGCCA GGAAAACAAA ATCCCGTTCC TGGGCGATGT CCCGGTGGTC
GGCAATCTTT TCAAGAGCAA GACTAAAGAG ACGACGAAAC GCGAAATGCT GATATTCATC
ACGCCCAAGG TGATTGCGGA CAGCGGTCCG AAGAGGTAA
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| Protein sequence | MKHISSLSMN FCRPAAIGIT LAFLSLTAVA QGAISAIAGS VQGGVEILKI DFTDALTAPP
TGFTIQSPAR IALDFPGVTN ASGKSAHTVN LGNLKSINIV QASERSRVVL NLKSPTSYHV
DVQGKTLILS LAPVAGAAPV AAAPVVPFAE NQNSDILPLK DIDFRRGTDG SGRVIVTLAN
SQAGVDLQQQ AKGIAVEFMR TSLPEGLRRR LDVTDFGTPV QTVTTTQTGE RVRMLIESSG
DWEHSAYQSD NQFVVEIRQK KIDQSKLTQG PGYSGEKLSL NFQNIEVRSL LQVIADFTNF
NIVTSDTVTG SLTLRLKDVP WDQALQIILD ARGLGMRKAG SVLWVAPKDE IDARTRKDFE
VAQAIQRLEP LRTQAYQLNY AKASDILTQL NASGGAGGSS TRFLSERGSA IAEPRTNQLF
VTDTASKQEE VRQLLARLDV AVRQVMIEAR IVEARDSFGR SLGVRLGSTD LSASRKGTGG
YGIGGNKRVA YGTSYSDAVK ASGANGSTAP DTGGNFVNLP ASLSSVNTVG SFALSIFNAA
TNKFLTLELS AMEADGKGRI VSSPRIITAD QTKALIEQGT EYPYAVTAPN GATTLAFKKA
VLKLEVSPQI TPEGNIILDL DVSKDSRGET TSQGVAIDTK HIKTQILIEN GGTVVIGGIF
EMEETSQENK IPFLGDVPVV GNLFKSKTKE TTKREMLIFI TPKVIADSGP KR
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