Gene Veis_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0015 
Symbol 
ID4695290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand- 
Start bp24349 
End bp24993 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content58% 
IMG OID639847801 
ProductTetR family transcriptional regulator 
Protein accessionYP_994826 
Protein GI121607019 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.576639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAAA AATTTCCTTT CCGGGCACGC AATCCTGACA ACACCAGGCA ACTGATTTTG 
GACGCGGCCC GCATCGAATT CGCCAAGGCC GGCCTGTCCG GTGCCCGGGT GGACAAGATC 
GCCGAGACCT CGGGAGTCAA CAAGCGGATG ATCTACCATT ATTTCGGCGG CAAGGAGTTG 
TTGTTTGCTG CGGTCGTGGA GGCTGCCTAC ATGGATATCC GCAGCCAGGA GCAGGCGCTC 
GGTCTCGATG GGCTTGCGCC TTCCGAGGCC ATGCGCCTGC TGCTCGATTT CACCTGGAAA 
TACCATTTGC AAAACCCGGC GTTCATCACG CTGGTCAATA GCGAGAACCT GCACCAGGCC 
AGGCACATCG AGGGCAACCG GCAACTGCGC AAGCTCCAGA AAGCCTATGT CGGCATGGTC 
GAAGGCATTT TGCAGCGCGG CGTGGCCAGC GGTGAGTTTC GTCAGGGGAT CGATGCGGTG 
CAGCTTTGCA TCAGCATTGC GGCCGTCAGT TTTTACTATC TGAACAATCG GTACACGGGC 
CGTGTGCTGT TTGGCTTCGA TTTCATGAAC AAGAATGCGC TGCTGGCGCG CCGCCAGTTC 
AACACGCAGA CCATCATGCG CATGGTGGCC GCGCGGCCTG ATTGA
 
Protein sequence
MGEKFPFRAR NPDNTRQLIL DAARIEFAKA GLSGARVDKI AETSGVNKRM IYHYFGGKEL 
LFAAVVEAAY MDIRSQEQAL GLDGLAPSEA MRLLLDFTWK YHLQNPAFIT LVNSENLHQA 
RHIEGNRQLR KLQKAYVGMV EGILQRGVAS GEFRQGIDAV QLCISIAAVS FYYLNNRYTG 
RVLFGFDFMN KNALLARRQF NTQTIMRMVA ARPD