Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0012 |
Symbol | |
ID | 4690482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 18688 |
End bp | 20538 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639847798 |
Product | putative inner membrane transmembrane protein |
Protein accession | YP_994823 |
Protein GI | 121607016 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.672275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGGATTG CCCGATCGTT TCGTCCGCTT GTTTTTGCCC CTTCTTCCCG GCGGCCCCGC CACGGCGCCC ATCGACCTGT GACTCCACCG ACCCCCGCCA TCGTGACCCA ACAGGCCGTC AGCCCCCTGC CGCGCTGGGC GCTGCTGCTG CTGTGCAGCG CCTATGTGGT GCCCGGCTTC GTCGGGCGCG AGCCATGGAA GAGCGCCGAT ATCACGGCCT TTGGCTACAT GCTGGCGTTG GCCCGGGGGC AGACCCCGTG GTTCGGCCCG CTGCTGGGGG GGATGCCCCC CGAATCCGAG AGTCTGCTGC CTTACTGGCT CGGGGCCTGG GCGCTGCAAC TGGCGCCGCC GTGGCTATCG GCCGAACTGG CGGCGCGCAT TCCTTTTGCC GCCCTGCTGC TCGTCACGCT GCTGGCCACC TGGTACGGCA CGTACTACCT GGCCCGCAGC CCGGGCGCCC AGCCCGTGGC GTTTGCCTTT GGCGGCGAGG CCAACCCGCC CGACTATGCG CGCGCGATGG CCGACGGGGC GCTGCTGGCC TTGATTGCCT GTCTGGGCCT GGCGCAGTTG TCGCATGAGA TGAGCAGCCA TCTGGCGCAG TTGGGCTGCG TGGCGCTGCT TTTTTTTGCG CTCGCCGCAA TGCCGCACCG CAGGTGGGCG TCGGCCCTGG CCCTGGTCTT GGGCATGTTC GGGCTGACGC TGTCCGGCGC GCCGGCGCTG GCCGCGCTGC TGGGTGTGGG CAGCATGGTG CTGGTGCTCC ATGCCCCCGG CGATCAGAGC GGCCGCAGAC TGCGCTGGGT CTTGGCCCTG GCGGCCGTCA CGCTGGCGGC GGCCTTGCTG GCCTGGGGTC TGCATTGCTG GCGCTGGCGG ATCGTGTCCG CCGATGCCGT CGGCAAGGAA TGGCAGAGCC TGGCCCGGCT GCTGCTGTGG TTTGGCTGGC CCGCATGGCC GTTGGCGCTG TGGACTGTCT GGCGCTGGCG CCGGCAGATC CTCAGCCGCC AGGGGCACCG GCATTTGCTG CTGCCGCTGT GGTTTTGCGC GCTGTCGCTC GCCGCCGCCA TCACCACCCG GCCCGCAGAC CGGGCCTTGC TGCCGGGTTT GCCGGCGCTG GCCGCTCTGG CGGCCTTTGC CCTGCCGACG CTGCGCCGCA GCGTGGGGGC GTTGATCGAC TGGTTCACGC TGCTGTTTTT CAGCGCCTCG GCGCTGGCGA TCTGGGTGAT CTGGATTGCC ATGCAGACCG GATTTCCGGC CAAACCGGCG GCCAATGTGG CCAAACTGGC GCCCGACTTC GTGCCGCAGT TCTCGGCCTT GGCGCTGGCG CCGGCGCTGG CCGCGACGGC GCTGTGGTGC CTTTTGGTCT GGTGGCGCGC CGCCCGCGAC CGCGCCCCGA TCTGGAAGAG CCTGGTGCTG CCCGCCAGCG GCGCCACGCT CGGCTGGCTG CTGCTGATGA CGCTGTGGCT GCCCCTGCTC GACCATGCGC GCAGCTATGG CCCGCAGGTG CGCAGCGTGG TGGCGGCGCT CGGGCCTGCG CCGGGCTGCA TCGAAACGCT GGGGCTGCAT CGGGGCCAGG TCGCGGCCTT GCAGTACCAC GGCCGATTGG CGCTGCAACC GGCCGGCGGG GCCGATGCTT GCCAATGGCT GCTGGCCGAT GGCGCGGCCT GGCCCGTTTC CGGGCGCATG GTCGATGCGG GGCTCTGGGA GTTCGAGGCC ATCCTGCCCC GCCCTACGGA CAACAACGAC CATCTGCTGC TGTTTCACCG CCTGGCTGCG GCGCGCGGGA CGGATGGGCC GCGCGGGTCG GAGGGGGCGG ACGAGCCGGA TGGGCCGGAT GGGCCGCCGC GCGGACGATA G
|
Protein sequence | MRIARSFRPL VFAPSSRRPR HGAHRPVTPP TPAIVTQQAV SPLPRWALLL LCSAYVVPGF VGREPWKSAD ITAFGYMLAL ARGQTPWFGP LLGGMPPESE SLLPYWLGAW ALQLAPPWLS AELAARIPFA ALLLVTLLAT WYGTYYLARS PGAQPVAFAF GGEANPPDYA RAMADGALLA LIACLGLAQL SHEMSSHLAQ LGCVALLFFA LAAMPHRRWA SALALVLGMF GLTLSGAPAL AALLGVGSMV LVLHAPGDQS GRRLRWVLAL AAVTLAAALL AWGLHCWRWR IVSADAVGKE WQSLARLLLW FGWPAWPLAL WTVWRWRRQI LSRQGHRHLL LPLWFCALSL AAAITTRPAD RALLPGLPAL AALAAFALPT LRRSVGALID WFTLLFFSAS ALAIWVIWIA MQTGFPAKPA ANVAKLAPDF VPQFSALALA PALAATALWC LLVWWRAARD RAPIWKSLVL PASGATLGWL LLMTLWLPLL DHARSYGPQV RSVVAALGPA PGCIETLGLH RGQVAALQYH GRLALQPAGG ADACQWLLAD GAAWPVSGRM VDAGLWEFEA ILPRPTDNND HLLLFHRLAA ARGTDGPRGS EGADEPDGPD GPPRGR
|
| |