| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3506 |
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| Symbol | |
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| ID | 4679168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 3463294 |
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| End bp | 3464910 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639847759 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_994784 |
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| Protein GI | 121599125 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCAAG TCCCACATCC GCGCGCGCGC CGCGCGTTGA GCGCCGCCGT CGCCGCGGCC
ACCGCCGTGC TGCTCGCCGG CTGCGCGGTC GGGCCCGACT ATCACCGCCC CGACGCGGCG
ATTCCCGCCG CGTACAAGGA AGCGCCGCCC GGCTGGAAGC TCGCGCAGCC GGCCGACCGC
GCGGACCGCG GCCCGTGGTG GTCGATCTAC GACGATGCGC AACTGAATGC GCTGATCGAC
AAGCTCAACG CGTCGAACCA GACCGTCGCG CAATACGCGG CCGCGTACCG GCAGGCGCGC
GCGCTCGTCG CCGAGGCGCG CGCGTCGTAC TTTCCGACGC TCGGGCTGAC CGCGAGCGAA
TCGCGCGCGT CGAGCGCGCT GTCGTCGGGC ACCGCGTCGC GCGGCACGAC GCGCACGGTC
GGCAACACGT ACAGCGTCGG CCTCGATGCG TCGTGGGAGC CGGACCTGTG GGGCAAGGTG
AGTCGCACGG TCGGCGCGCA GAAGGCAGGA GAAGCGGCCG CGGCCGCCGA TCTCGCGAAC
GCGCGGCTGT CCGCGCAGGC GACGCTCGCG GAGACCTACT TCCAGCTGCG CGCCGCGGAC
GCGACGCAAA AGCTGCTCGA CGATACCGTC GAGTCGTACC GGAAATCGCT GCAGCTCACG
CAGAACCAGT ACGCGCAGGG CGTCGCCGCG CGCGCGGACG TGATCCAGGC GCAGACCCAG
CTCCAATCGG CGCAGGCCGC CGCGATCGAC AACGGCATCG CGCGCGCGCA GTACGAGCAC
GCGATCGCGA CGCTCGTCGG CGAGCCGGCG CCGACGTTCT CGCTGCCGCC GATGCCGCTC
ACGGCCGAGC CGCCCGCGAT GCCGATCGAC GTGCCGTCGG CGATCCTCGA GCGGCGGCCC
GACGTCGCCG CCGCCGAGCG GCGCGCGGCC GCCGCGAACG AGCAGATCGG CGTCGCGATC
GCCGCGTTCT TCCCGACGCT CACGCTGTCC GCATCGGGCG GCTTTCAGAG CTCGGTGTGG
TCGCAGCTGT TCACGCTGCC CGCACGCTTC TGGTCGGTCG GCCCGCAGCT CGCCGCGACG
CTGTTCGACG CGGGCCTGCG CGCCGCGCAG ACGGAAGCGG CGCGCGCGAC CTACGATCAG
GACGTCGCCG CGTACCGGGC GGCCGTGCTC TCCGCGTTCC AGGACGTCGA GGACAACCTC
GCGTCGCAGC GCATCCTCGA GCAGGAAATC GTCGTGCAGC GGCAGGCGGT CGAATCCGCG
CAGCACTCGC TCGACATCAC GCTCAACCAG TACAAGGCGG GCACCGTCGG CTATCTGAAC
GTGCTGACCG CGCAGACAAC CGCGTTCAGC GCGCGGCAGA AGCTCGCGGC CCTCTCCGGG
CAGCGGATGG TGTCGTCGGT CGGACTCGTG AAAGCGCTCG GCGGCGGATG GGACGGGTCG
CAGATCGCGC GCGAGACAGG CGGCATGCAG GCGCCCGCCG CGCCGGCCGG GGCGGCGGCG
CCGGCGGCCA TGCCGGCCGC GGCCGTTGCG CCGGCGGCAC GCCCGGCGGC CGTGGTCGCG
GCGGCCGGGC CCGATACGCA GGCTCGCCGG CCGCGCGCCA CGCCCGCCGC GCAATAG
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| Protein sequence | MPQVPHPRAR RALSAAVAAA TAVLLAGCAV GPDYHRPDAA IPAAYKEAPP GWKLAQPADR
ADRGPWWSIY DDAQLNALID KLNASNQTVA QYAAAYRQAR ALVAEARASY FPTLGLTASE
SRASSALSSG TASRGTTRTV GNTYSVGLDA SWEPDLWGKV SRTVGAQKAG EAAAAADLAN
ARLSAQATLA ETYFQLRAAD ATQKLLDDTV ESYRKSLQLT QNQYAQGVAA RADVIQAQTQ
LQSAQAAAID NGIARAQYEH AIATLVGEPA PTFSLPPMPL TAEPPAMPID VPSAILERRP
DVAAAERRAA AANEQIGVAI AAFFPTLTLS ASGGFQSSVW SQLFTLPARF WSVGPQLAAT
LFDAGLRAAQ TEAARATYDQ DVAAYRAAVL SAFQDVEDNL ASQRILEQEI VVQRQAVESA
QHSLDITLNQ YKAGTVGYLN VLTAQTTAFS ARQKLAALSG QRMVSSVGLV KALGGGWDGS
QIARETGGMQ APAAPAGAAA PAAMPAAAVA PAARPAAVVA AAGPDTQARR PRATPAAQ
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