Gene BMASAVP1_A3496 details

Gene Information

• Locus tag: BMASAVP1_A3496
• Symbol: fliN
• ID: 4679972
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: -
• Start bp: 3455171
• End bp: 3455659
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639847749
• Product: flagellar motor switch protein FliN
• Protein accession: YP_994774
• Protein GI: 121599067
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACTCGA CCCCCGAGGC CGACGGCATC GACGAGCCGG CGTTTGCGGA CACCGCGATG 
AGCGCTGCCG CGGCCGGGAA CGCGGCGGGT GCCGCGCCGC AGGAGGAAAT GGCGATGGAC 
GACTGGGCCG CCGCGCTCGC CGAGCAGAAT CAGCAGCCGA TCGAGACGGG CGCGACGGGC 
GCCGGCGTGT TCCGGCCGCT GTCGAAGGCC ACGGCGAGCT CGACGCACAA CGACATCGAC 
CTGATTCTCG ACATCCCGGT CAAGATGACG GTCGAGCTCG GCCGCACGAA GATCGCGATC 
CGCAACCTGC TGCAGCTCGC GCAGGGCTCG GTGGTCGAGC TCGACGGGCT CGCCGGCGAG 
CCGATGGACG TGCTCGTCAA CGGCTGCCTG ATCGCGCAGG GCGAAGTGGT GGTCGTCAAC 
GACAAGTTCG GCATCCGGCT CACCGACATC ATCACGCCGT CCGAACGCAT CCGGAAGCTG 
AACCGATGA 

 

Protein sequence

MNSTPEADGI DEPAFADTAM SAAAAGNAAG AAPQEEMAMD DWAAALAEQN QQPIETGATG 
AGVFRPLSKA TASSTHNDID LILDIPVKMT VELGRTKIAI RNLLQLAQGS VVELDGLAGE 
PMDVLVNGCL IAQGEVVVVN DKFGIRLTDI ITPSERIRKL NR