Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3453 |
Symbol | |
ID | 4681840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 3418928 |
End bp | 3419962 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639847706 |
Product | putative 3-oxoacyl-(acyl-carrier-protein) synthase III |
Protein accession | YP_994731 |
Protein GI | 121598801 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.058375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACCGG CCGCCCATCC GCCGCGCGCG GCGATCGCGG ACATCGCCGG GCATCTGCCC GAGCAGGTGC TGACGAACGA CGTCCTCGCG CAGCTCTATC CGGACTGGCC GGCGGAGAAG ATCCTCGCGA AGACGGGCAT CCGCGAACGC CGCATCGCCG CTCCCCGCGA GACGGCCGCC GACCTCGCGT ATGAAGCGGC GCGCAAGCTG TTCGCGCAAG GCGCCGTCGG CGCAGACCAG GTCGATTTCG TGATTCTCTG CACGCAGGCG CCCGACTACG TGCTGCCCAC GTCCGCCTGC ATGCTCCAGC ATCGCCTCGG CATTCCGACG CACGCGGGGG CGCTCGACGT CAACCTCGGC TGCTCGGGTT ACGTGTACGG GCTGTCGCTC GCGAAGGGGC TCGTCGAGAC GGGCGCCGCG CGCTGCGTGC TGCTGCTCAC GGCCGACACC TATTCGAAGT ATCTGCACCC GCTCGACAAG AGCGTGCGCA CGCTGTTCGG CGACGGCGCG AGCGCGACCG CCGTGATCGC CGAACACGGC GAGCTCGAGC GTATCGGCCC CTTCGTGTTC GGCACGGACG GCCGCGGCGC GCCGAACCTG ATCGTGAAGG CGGGCCTCTT TCGCGAACCG AAGAGCGCCG ACAGCGCGCG CGAGCACGAG GACGCATCGG GCAACGTGCG CACCGACGAG CATCTGTACA TGAACGGCGC GGAGGTGATG GCGTTCTCGC TCGCCGAAGT GCCGCGCGCC GCCGACCGGC TGCTCGCGCT CGCGGGCGAG CCGCGCGAGA ACATCGATTG CTTCGTGCTG CATCAGGCGA ACCGCTTCAT GCTCGATGCG CTGCGCAAGA AAATGAAGAT CCCCGAACAC AAATTCCCCG TGCTGATGGA GCACTGCGGC AATACCGTCT CGTCGACACT GCCGCTCGCG CTCGAGACGA TGCGGGCAAA CGGCACGCTC GCGCGCGGCA TGCGTCTGAT GCTGCTGGGA TTCGGCGTCG GCTACTCCTG GGCCGGCTGC CTCGTGAACT TTTAG
|
Protein sequence | MTPAAHPPRA AIADIAGHLP EQVLTNDVLA QLYPDWPAEK ILAKTGIRER RIAAPRETAA DLAYEAARKL FAQGAVGADQ VDFVILCTQA PDYVLPTSAC MLQHRLGIPT HAGALDVNLG CSGYVYGLSL AKGLVETGAA RCVLLLTADT YSKYLHPLDK SVRTLFGDGA SATAVIAEHG ELERIGPFVF GTDGRGAPNL IVKAGLFREP KSADSAREHE DASGNVRTDE HLYMNGAEVM AFSLAEVPRA ADRLLALAGE PRENIDCFVL HQANRFMLDA LRKKMKIPEH KFPVLMEHCG NTVSSTLPLA LETMRANGTL ARGMRLMLLG FGVGYSWAGC LVNF
|
| |