Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3449 |
Symbol | fliD-1 |
ID | 4679384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 3413385 |
End bp | 3414905 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639847702 |
Product | flagellar hook-associated protein 2 |
Protein accession | YP_994727 |
Protein GI | 121599739 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0369122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACGC CCGTCACCAG CACGACGCAG CAGCAAACCA ACTCGGCGCT GCAGCAAGCA GCGCAGTCGA TCATCAGCGG CTCGACAGGC AATTCGTCGA TGGACGTCAA CTCGCTCGTC ACCGCGCTCG TCAACGCGAA GACGGCCGGC CAGAGCGCGG CGCTGTCGAC TTCGATCGCG ACCGACCAGA CGACGCTTTC CGCGCTCGGC ACGCTGAAAG CCGCGCTCAC CGCGCTGCAA GCGGGGATCG GCTCGCTCAG CGACGGCACG CTGACCCAGA AATTCACCGC CACGGCAACG GGCACCGGGC TCACCGCGAC GACGGGCGCG GGTGCGGTGG CCGGCAGCTA CTCGGTCGCC GTCACGCAGA TCGCCACGTC GCAGACGCTG TCTTCCGGCG CATTCAATGC GACGCAGCAG CTCGGCACCG GCACGCTGAC GCTGAGCGTC GGCGGCAAAT CGACGTCGAT CTCGATCGAT TCGACGAACA ACACGCTTTC CGGCATCACC GCCGCGATCA ACTCCGCGTC GAACAACCCC GGCGTGACGG CGACGATCGT CACGGGCACC GACGGCGCGC ACCTCGTGCT GCGCTCGGCA AGCACGGGCG CGGCCAACGT GATCAACGTC GGCGTGAGCA ACCTGTCCGG CGACAACGGG CTGTCGAGCC TCGCCGTCAC GTCGACGGCG AGCACGACGG GCGGCCAGTC GACGATCCGC TCGGGCGGCA GCGTCGCATG GTCGCAAAGC ACCTCCGCTC AGGACGCCGA ATTCACGGTG GGCGGCATCG CCGCGTCGAG CGCGAGCAAT GCGGTGTCGG GCGCGATCGC CGGCGTCACG CTGAACCTCA CGCAAGCCGC CGTCGGCGCC ACGCAGACGC TGAACGTGAC CACCGACACC ACCGCGCAGG CCACCGCGAT CACGAACGTC GTCAACCTGT ACAACACGGT GATCACGACG ATGTCGTCGC TGTCGTCGCT ATCCGGCGCG GGCACCAGCT CGCAAAGCGC GGGGCCGCTC CTCGGCGACT CCACGCTCAA CATGATCCGC AACTCGCTCG CGCGCGTGGT GGGCGCGGGC GTGACGACGG GCGGCTCGAC CACGTCGCTC GCGTCGATCG GCATCAAGTT CGCCGACGGC TCGTCGTCGT CGCAGACGGA CGGCGCACTG ACCATCGATA CGGCCAAGCT CAACGCCGCG CTGCAAAACA GCCCGTCGAC CGTCGCCGCG CTCTTCAATT CGACGAACGG CATCGGCGCG CAGCTGAACA CCACGATCCA GAACTATGTG CAGACGGGCG GCGTCTTCGA TACGCGCTCG AACGCGCTGA ACCAGGACCT GAAGAGCCTC GCGCAGCAGC AGACGCGGCT CGCGTCGTAC GCGTCGCAAC TCACGTCGCA ATACAACGCG CAGTTCACCG CGCTCAACAC GCTGATGGCG CAGATGAACA GCAACTCGAA CTACCTGACG CAGCTGTTCG GCGGCAGCAA CAGCTCGGGC GCGATGGCGA ACAACAAGTA A
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Protein sequence | MSTPVTSTTQ QQTNSALQQA AQSIISGSTG NSSMDVNSLV TALVNAKTAG QSAALSTSIA TDQTTLSALG TLKAALTALQ AGIGSLSDGT LTQKFTATAT GTGLTATTGA GAVAGSYSVA VTQIATSQTL SSGAFNATQQ LGTGTLTLSV GGKSTSISID STNNTLSGIT AAINSASNNP GVTATIVTGT DGAHLVLRSA STGAANVINV GVSNLSGDNG LSSLAVTSTA STTGGQSTIR SGGSVAWSQS TSAQDAEFTV GGIAASSASN AVSGAIAGVT LNLTQAAVGA TQTLNVTTDT TAQATAITNV VNLYNTVITT MSSLSSLSGA GTSSQSAGPL LGDSTLNMIR NSLARVVGAG VTTGGSTTSL ASIGIKFADG SSSSQTDGAL TIDTAKLNAA LQNSPSTVAA LFNSTNGIGA QLNTTIQNYV QTGGVFDTRS NALNQDLKSL AQQQTRLASY ASQLTSQYNA QFTALNTLMA QMNSNSNYLT QLFGGSNSSG AMANNK
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