| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3425 |
|---|
| Symbol | |
|---|
| ID | 4681116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 3390453 |
|---|
| End bp | 3391703 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639847678 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_994703 |
|---|
| Protein GI | 121599562 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.156035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCTTCC AACACACTCT GACTCGCTGG CTCGGCGCGC TGAGTCTCGC CGCGGCCACG
GCCGCGCTCG TCGCCGCGTG CGGCGGCGGC GGCGACGGCG GCTCGAACGC ATCGGTAAAC
ACCGGCACCG GCGGCTCGGG CAGCACGCCG CTCGCGTCGA ACCAGGCGGC GATCACCGTC
AGCACGGGCG TCGCGACCAT CATCAACATG CCGACCGTCA GCGTGACGAT CTGCGCGCCC
GGCACGTCCG CGTGCCAGAC GATCGGCAAC GTGCTCGTCG ACACAGCGTC GTACGGGCTG
CGGATCGTCA ACACCGCCGC GTCGGGCGTG CTCGGCAGCC TGCCCGTGTC GAGCGTGAGC
GGCGGCACGC TCACCGAGTG CGGCAAGTTC GTGACGAGCT ACACGTGGGG CACCGTGCGC
ACCGCCGACG TGAGGATCGC CGGCGAGCAG GCGAGTTCGC TGCCGATCCA GATCATCGGC
GATCTGGGCT CCTTCGGCGT GCCGAGCTCG TGCTCGAACG GCAACGCGCC GTCGAACACC
GCGGCCGATC TCGGCGCGAA CGGCATTCTC GGGATCGGGC CCGCGCCGTA CGACTGCGGC
GCGAACTGCA CGACGTCGAC GCTCTACAGC AACTACTACG CGTGCCCGAA CGGCAACACG
AGCTGCCAGG TCACGACGGT GCCGCTCGCG CAGCAGGTCG CCAACCCGGT GCCGCGCTTT
GCGACCGACA ACAACGGCGT GATCGTCGCG ATGAACCCGC CGGCGGGCGG CAGCGCGACG
GGCACGCTGA CGTTCGGGAT CAACACCCAG TCGAACAACG CGTTGCCGGC GGGCGTGACG
AAGCTCACCT CGACGACCGC GGGCGACCTG ACGGGCACGC TGCTCGGCCG TGCGATCACG
ACGGCGTTCT TCGATACCGG CTCGAACGCG TACTTCTTCG ATACGGGCGG CAGCACGGCG
GTCTCGCTGC CCGTGTGCAG CAACAATTCG TCGTTCTACT GCCCGTCGAG CACGCAAACG
ACGACGGCCA CCGTCGTCGG CCTGAACGGC GCGCAGGCCT CGCAGTCGAT CTCGATCGGC
AACGCGAGCG CGCTGTTTTC GTCGTACAAA TCGGCGGTGC CGAATCTCGG CGGCCCGTTC
GGCAACACGC GGGTGCTCGA TTTCGGCTTG CCGCACTTTT TCGGCAAGAC ACTGTACTTC
GGGATGGACC TGACTGGCAG CGGCGGTGCG GCGCCGTATG TCGCGTTTTG A
|
|---|
| Protein sequence | MRFQHTLTRW LGALSLAAAT AALVAACGGG GDGGSNASVN TGTGGSGSTP LASNQAAITV
STGVATIINM PTVSVTICAP GTSACQTIGN VLVDTASYGL RIVNTAASGV LGSLPVSSVS
GGTLTECGKF VTSYTWGTVR TADVRIAGEQ ASSLPIQIIG DLGSFGVPSS CSNGNAPSNT
AADLGANGIL GIGPAPYDCG ANCTTSTLYS NYYACPNGNT SCQVTTVPLA QQVANPVPRF
ATDNNGVIVA MNPPAGGSAT GTLTFGINTQ SNNALPAGVT KLTSTTAGDL TGTLLGRAIT
TAFFDTGSNA YFFDTGGSTA VSLPVCSNNS SFYCPSSTQT TTATVVGLNG AQASQSISIG
NASALFSSYK SAVPNLGGPF GNTRVLDFGL PHFFGKTLYF GMDLTGSGGA APYVAF
|
|---|
| |