| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3379 |
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| Symbol | mmsA |
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| ID | 4679925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 3344751 |
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| End bp | 3346373 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639847633 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_994658 |
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| Protein GI | 121601329 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.25753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATCGCG CATGGGGGCC GCGGGTACGC TTCATTCCCG AAGCGCGCGA TACGCGTGCA
CGGCGAAAAG CGGCAACGGC AACCACGGAG GACGACATGA CCGGCAGCAC CCATTCGAAC
GATTCGCGCG TGCGCGCACT GGCCCATTTC ATCGGCGGGC GCGCGCTCGA CGGCGCGAGC
GACCGTTACG GCGACGTGTT CGATCCGGCC CTCGGCACGG TGACGGCGCG CGTGCCGCTC
GCGAGCGGCG CGGAAGTCGA TGCGGCCGTC GCCGCCGCGG CCGCCGCGTT CCCCGCGTGG
AGCGAGACCT CGCCGCTCAA GCGCGCGCGC GTGATGTTCA AGTTCAAGGA GCTGCTCGAC
CGCCATCACG ACGAGCTCGC CGAGCTGATC ACCCGCGAGC ACGGCAAGGT GTTCTCGGAT
GCGAAGGGCG AGGTGATGCG CGGAATCGAG GTGGTCGAAT TCGCGTGCGG CATTCCGAAT
CTGCTGAAGA CCGACTTCAC CGACCAGATC GGCGGCGGCA TCGACAACTG GAACCTGCGG
CAGCCGCTTG GCGTCGTCGC CGGCATCACG CCGTTCAATT TTCCGATGAT GGTGCCGTGC
TGGATGTTTC CGGTGGCGAT CGCGTGCGGC AACACGTTCG TGCTCAAGCC TTCCGAGCGC
GATCCGTCGG CGTCGATCCG GCTCGCCGAG CTGCTGAAGG AAGCGGGGCT GCCCGACGGC
GTGTTCAACG TCGTGCACGG CGACAAGACG GCCGTCGACG CGCTGATCGC GCATCCGGAT
GTGGCCGCGC TGTCGTTCGT CGGTTCGACG CCGATCGCCG AGTACATTCA CACGCAAGCC
GCGCGCCGCG GCAAGCGCGT GCAGGCGCTC GGCGGCGCGA AGAACCATCT CGTCGTGATG
CCGGACGCGA ACCTCGATCA GGCCGTGGAC GCGCTCGTCG GCGCCGCGTA CGGCTCGGCG
GGCGAGCGCT GCATGGCGAT TTCCGTCGCG GTCGCGGTGG GCGGCGTCGC CGACGCGCTC
GTCGAGCGGC TCGCCGAGCG TGCGAAGGCG CTGAAGATCG GCAACGGGAT GAACGCCGAC
GTCGAAATGG GGCCGCTCGT GACGGCCGCG CATCGCGCGA AGGTGTCCGC GTACATCGAC
GCCGGCGTCG CGGCGGGCGC GAAGCTCGTC GTCGACGGGC GCCGGCACGT CGTCGCCGGC
GGCGAGAACG GCTTCTTCCT CGGCGGCACG CTGTTCGATG ACGTGACGAC CGACATGTCG
ATCTATCGCG AGGAAATCTT CGGGCCGGTG CTGGCCGTCG TGCGGGTGCC GGATTTCGCG
AGCGCGGTCG AGCTCATCAA CGCGCACGAG TTCGCCAACG GCGTGTCGTG CTTCACGTCC
GACGGCGGCA TCGCGCGCGC GTTCGCGCGG AAGATCCAGG TCGGGATGGT GGGCATCAAC
GTGCCGATCC CGGTGCCGAT GGCGTGGCAT TCGTTCGGCG GCTGGAAGCG CTCGCTGTTC
GGCGATCACC ACGCATACGG CGAGGAGGGC GTGCGTTTCT ACACGCGCTA CAAGAGCGTG
ATGCAGCGCT GGCCGGACAG CATCGCGAAG GGCGCGGAGT TCACGATGCC TGTCGCGAAG
TGA
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| Protein sequence | MDRAWGPRVR FIPEARDTRA RRKAATATTE DDMTGSTHSN DSRVRALAHF IGGRALDGAS
DRYGDVFDPA LGTVTARVPL ASGAEVDAAV AAAAAAFPAW SETSPLKRAR VMFKFKELLD
RHHDELAELI TREHGKVFSD AKGEVMRGIE VVEFACGIPN LLKTDFTDQI GGGIDNWNLR
QPLGVVAGIT PFNFPMMVPC WMFPVAIACG NTFVLKPSER DPSASIRLAE LLKEAGLPDG
VFNVVHGDKT AVDALIAHPD VAALSFVGST PIAEYIHTQA ARRGKRVQAL GGAKNHLVVM
PDANLDQAVD ALVGAAYGSA GERCMAISVA VAVGGVADAL VERLAERAKA LKIGNGMNAD
VEMGPLVTAA HRAKVSAYID AGVAAGAKLV VDGRRHVVAG GENGFFLGGT LFDDVTTDMS
IYREEIFGPV LAVVRVPDFA SAVELINAHE FANGVSCFTS DGGIARAFAR KIQVGMVGIN
VPIPVPMAWH SFGGWKRSLF GDHHAYGEEG VRFYTRYKSV MQRWPDSIAK GAEFTMPVAK
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