Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3374 |
Symbol | |
ID | 4678984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 3338572 |
End bp | 3339456 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639847628 |
Product | putative amino acid uptake ABC transporter, permease protein |
Protein accession | YP_994653 |
Protein GI | 121599165 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATCT TCGGCATTCC GGTGTCGGCG ATGCTGAGCC AATTGTTGCT CGGACTCGTC AACGGCTCGT TCTACGCGAT CCTGAGCCTC GGGCTCGCGG TGATATTCGG GCTGCTCAAC GTGATCAACT TCGCGCACGG CGCGCTCTTC ATGCTGGGTG CGATGCTCGC GTGGATGGGG CTCAACTATC TCGGCCTGCC GTACTGGGCG ATGCTCGTGC TCGCGCCCGT CGTCGTCGGG CTGTTCGGGA TCCTGATCGA GCGCTCGATG CTGCGCTGGC TCTACAAGCT CGATCACCTG TACGGCCTGC TGCTGACGTT CGGGCTCACG CTCGTCGTCG AAGGCGTGTT CCGCGCGATC TACGGCTCGT CCGGGCAGCC GTACGACGTG CCCGCGCTGC TCGAGGGCGC GACCAACGTC GGCTTCATGT TCCTGCCGAA CTACCGCGCG TGGGTCGTCG TCGCGTCGCT CGCGGTATGT CTTGCGACCT GGTTCGTGAT CGAGAAGACG CGGCTCGGCG CCTATCTGCG CGCGGGCACG GAGAATCCGA AGCTCGTCGA GGCGTTCGGC GTCAACGTGC CGATGATGGT CACGCTGACC TACGGCTTCG GCGTTGCGCT CGCCGCGTTC GCCGGCGTGC TCGCGGCGCC CGTGATTCAG GTGTCGCCGC TGATGGGGCA GCCGATGATC ATCACGGTGT TCGCGGTCGT CGTGATCGGC GGCATGGGCT CGATTCTCGG CTCGATCGTC ACGGGCCTGA TGCTGGGCGT GGTCGAGGGC CTGACGCGCG TGTTCTATCC GGAAGCATCG GCGACGGTCG TCTTCGTGAT CATGGCGATC GTGCTGTTAA TTCGTCCGGC AGGTTTGTTC GGCAAGGAAA GATGA
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Protein sequence | MDIFGIPVSA MLSQLLLGLV NGSFYAILSL GLAVIFGLLN VINFAHGALF MLGAMLAWMG LNYLGLPYWA MLVLAPVVVG LFGILIERSM LRWLYKLDHL YGLLLTFGLT LVVEGVFRAI YGSSGQPYDV PALLEGATNV GFMFLPNYRA WVVVASLAVC LATWFVIEKT RLGAYLRAGT ENPKLVEAFG VNVPMMVTLT YGFGVALAAF AGVLAAPVIQ VSPLMGQPMI ITVFAVVVIG GMGSILGSIV TGLMLGVVEG LTRVFYPEAS ATVVFVIMAI VLLIRPAGLF GKER
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