Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3371 |
Symbol | |
ID | 4681303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 3334475 |
End bp | 3335896 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639847625 |
Product | putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein |
Protein accession | YP_994650 |
Protein GI | 121600617 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACGG CGGCGGCGAT ACGGGCGGCC GGCCGCGTTT TTTGTAATCG CGGCGCGGGC GGCATCGGCC GGAAGATCGA GGTAGAGGCA GCAGAAGGGC GCGTGCGATG CGCACGCGCG AGGGGAGCGC AACAGCAAGA AGAACGCGCC CTGCGCCGGT TTCACGTCGA ACGTGAAACC GGCGCGGCGG CGTGCAGGTT CGATCGGTGC GCCATGTCGC CATGGCCGCT CGATCGCGTT TCGCGCAGCG TTTGGAGACA CACAATGAAA ATGAAGCGAT GGATCGAGGT CGCGTTCGCG GCCGGCTGCC TATGTACTGC CGGGCTTGCG TCGGCGCAGG TGAAGATCGG CGTCACGGTT TCGGCAACGG GGGCCGCCGC GTCGCTCGGC ATTCCCGAGA AGAATACGGT TGCGTTGCTG CCGAAGGAGA TCGGCGGCAA GCGCGTCGAG TACATCGTGC TCGACGATGC GTCGGACACG AGCCGCGCAG TGCAGAACAC GCGCAAGCTG ATCGACGAGG ATCATGTCGA CGCGATCGTC GGCTCGTCGA TCACGCCGAA TGCGCTCGCG ATGATCGACG TCGTCGCGCA GGGCAAGACG CCGGCGATCT CGCTTGCCGC GAGCGCGCAC ATCATTGCGC CGATGGATGC GAAGCGCGCA TGGGTGTTCA AGACGCCGCA AAACGATCGC CTGATGGCTG ACGCGCTCGC CGGCTACATG GCGAAGCACG GCGTGAAGAC GGTCGGCTTC ATCGGCTTCG CGGATGCGTA TGGCGACGGC TGGTATGGCG TGTTCAGCGC GGCCGCCGCT GCGAACGGGC TCAGGATTGT CGCGAACGAG CGCTACAACC GCACCGATGC ATCGGTGACG GGGCAAGTGC TGAAGACGTT GGGCGCGCGC CCCGACGCGG TGCTGATCGC CGGCGCGGGC ACGCCCGCCG CGCTGCCCGC GAAGACGCTG AAGGCGCGCG GTTACACGGG CAAGGTCTAT CAGACGCACG GCGTCGCGAA CAACGATTTC CTGCGCGTCT GCGGCAAGGA TTGCGACGGC GAATTGCTGC CGGCGGGGCC GGTGCTCGTT GCCGATCAAC TGCCCGATTC GAATCCGGCC AAGCAGCCGG CGCTCGCGTA CAAGGCCGCG TATGAGAAGG CGTACGGCGC GGCAGCGGTG TCGACGTTCG GCGGCCATGT GTGGGACGCG GGGCTGATGC TCCAGCGCGC GATTCCGGAC GCGCTGAAGA AGGCGCAGCC CGGCACGCCG GCGTTCCGCG AGGCGCTGCG CGGTGCGCTC GAGAACGTGA AGGACTTGCC GGTGTCGCAC GGCGTGATCA ACACGACGCC CGCCGACCAC AACGGCTTCG ATACGCGCGC GCGCGTGATC GTGCAGATCG TCGGCGACAA GTGGAAACTG CAGGCTGATT GA
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Protein sequence | MATAAAIRAA GRVFCNRGAG GIGRKIEVEA AEGRVRCARA RGAQQQEERA LRRFHVERET GAAACRFDRC AMSPWPLDRV SRSVWRHTMK MKRWIEVAFA AGCLCTAGLA SAQVKIGVTV SATGAAASLG IPEKNTVALL PKEIGGKRVE YIVLDDASDT SRAVQNTRKL IDEDHVDAIV GSSITPNALA MIDVVAQGKT PAISLAASAH IIAPMDAKRA WVFKTPQNDR LMADALAGYM AKHGVKTVGF IGFADAYGDG WYGVFSAAAA ANGLRIVANE RYNRTDASVT GQVLKTLGAR PDAVLIAGAG TPAALPAKTL KARGYTGKVY QTHGVANNDF LRVCGKDCDG ELLPAGPVLV ADQLPDSNPA KQPALAYKAA YEKAYGAAAV STFGGHVWDA GLMLQRAIPD ALKKAQPGTP AFREALRGAL ENVKDLPVSH GVINTTPADH NGFDTRARVI VQIVGDKWKL QAD
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