Gene BMASAVP1_A3371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3371 
Symbol 
ID4681303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp3334475 
End bp3335896 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content67% 
IMG OID639847625 
Productputative amino acid uptake ABC transporter, periplasmic amino acid-binding protein 
Protein accessionYP_994650 
Protein GI121600617 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGG CGGCGGCGAT ACGGGCGGCC GGCCGCGTTT TTTGTAATCG CGGCGCGGGC 
GGCATCGGCC GGAAGATCGA GGTAGAGGCA GCAGAAGGGC GCGTGCGATG CGCACGCGCG
AGGGGAGCGC AACAGCAAGA AGAACGCGCC CTGCGCCGGT TTCACGTCGA ACGTGAAACC
GGCGCGGCGG CGTGCAGGTT CGATCGGTGC GCCATGTCGC CATGGCCGCT CGATCGCGTT
TCGCGCAGCG TTTGGAGACA CACAATGAAA ATGAAGCGAT GGATCGAGGT CGCGTTCGCG
GCCGGCTGCC TATGTACTGC CGGGCTTGCG TCGGCGCAGG TGAAGATCGG CGTCACGGTT
TCGGCAACGG GGGCCGCCGC GTCGCTCGGC ATTCCCGAGA AGAATACGGT TGCGTTGCTG
CCGAAGGAGA TCGGCGGCAA GCGCGTCGAG TACATCGTGC TCGACGATGC GTCGGACACG
AGCCGCGCAG TGCAGAACAC GCGCAAGCTG ATCGACGAGG ATCATGTCGA CGCGATCGTC
GGCTCGTCGA TCACGCCGAA TGCGCTCGCG ATGATCGACG TCGTCGCGCA GGGCAAGACG
CCGGCGATCT CGCTTGCCGC GAGCGCGCAC ATCATTGCGC CGATGGATGC GAAGCGCGCA
TGGGTGTTCA AGACGCCGCA AAACGATCGC CTGATGGCTG ACGCGCTCGC CGGCTACATG
GCGAAGCACG GCGTGAAGAC GGTCGGCTTC ATCGGCTTCG CGGATGCGTA TGGCGACGGC
TGGTATGGCG TGTTCAGCGC GGCCGCCGCT GCGAACGGGC TCAGGATTGT CGCGAACGAG
CGCTACAACC GCACCGATGC ATCGGTGACG GGGCAAGTGC TGAAGACGTT GGGCGCGCGC
CCCGACGCGG TGCTGATCGC CGGCGCGGGC ACGCCCGCCG CGCTGCCCGC GAAGACGCTG
AAGGCGCGCG GTTACACGGG CAAGGTCTAT CAGACGCACG GCGTCGCGAA CAACGATTTC
CTGCGCGTCT GCGGCAAGGA TTGCGACGGC GAATTGCTGC CGGCGGGGCC GGTGCTCGTT
GCCGATCAAC TGCCCGATTC GAATCCGGCC AAGCAGCCGG CGCTCGCGTA CAAGGCCGCG
TATGAGAAGG CGTACGGCGC GGCAGCGGTG TCGACGTTCG GCGGCCATGT GTGGGACGCG
GGGCTGATGC TCCAGCGCGC GATTCCGGAC GCGCTGAAGA AGGCGCAGCC CGGCACGCCG
GCGTTCCGCG AGGCGCTGCG CGGTGCGCTC GAGAACGTGA AGGACTTGCC GGTGTCGCAC
GGCGTGATCA ACACGACGCC CGCCGACCAC AACGGCTTCG ATACGCGCGC GCGCGTGATC
GTGCAGATCG TCGGCGACAA GTGGAAACTG CAGGCTGATT GA
 
Protein sequence
MATAAAIRAA GRVFCNRGAG GIGRKIEVEA AEGRVRCARA RGAQQQEERA LRRFHVERET 
GAAACRFDRC AMSPWPLDRV SRSVWRHTMK MKRWIEVAFA AGCLCTAGLA SAQVKIGVTV
SATGAAASLG IPEKNTVALL PKEIGGKRVE YIVLDDASDT SRAVQNTRKL IDEDHVDAIV
GSSITPNALA MIDVVAQGKT PAISLAASAH IIAPMDAKRA WVFKTPQNDR LMADALAGYM
AKHGVKTVGF IGFADAYGDG WYGVFSAAAA ANGLRIVANE RYNRTDASVT GQVLKTLGAR
PDAVLIAGAG TPAALPAKTL KARGYTGKVY QTHGVANNDF LRVCGKDCDG ELLPAGPVLV
ADQLPDSNPA KQPALAYKAA YEKAYGAAAV STFGGHVWDA GLMLQRAIPD ALKKAQPGTP
AFREALRGAL ENVKDLPVSH GVINTTPADH NGFDTRARVI VQIVGDKWKL QAD