| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3348 |
|---|
| Symbol | priA |
|---|
| ID | 4679447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 3308937 |
|---|
| End bp | 3311204 |
|---|
| Gene Length | 2268 bp |
|---|
| Protein Length | 755 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639847602 |
|---|
| Product | primosome assembly protein PriA |
|---|
| Protein accession | YP_994627 |
|---|
| Protein GI | 121601494 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATG CGTTCGTGCG CGTCGCGCTC GATCATCCGC TGCCGACGCT GTTCGATTAC
CGGTATCGCG GCGACATGCC GGCGGCGCCC GGGATGCTCG TGCAGGTGCC GTTCGGCCGG
CGCAGCGTGG TCGGGCTCGT ATGCGAAGTG ACCGCTCACA CGGACGTGCC GGCGGCCAAG
CTGAAGGCCG TCGATGCGGT CTGTACGGAG CTGCCGCCGC TGTCGCGGCA CTGGCTCGAA
CTCGCCGCGT TCGCGGCCGA CTACTATCAG CGCGGGCTCG GTGAAGTTGC GCTGCCGGCG
CTGCCGCAGG CGCTGCGCGA CGTGCCGCGC TGGGGGCGGC TGCTTGCGCC CGAGCTGCGC
TACCGGCTGC TCGACGCCGG GCGCGCCGCG CTGCCGGACG CGCTGCCCGC GCGCGGCGCG
GCGCTGCGCC GGCTCGCGCA GGCGCTCGCC GACGCGCCTG CGCTCTCGCT CGCCGAGGTT
CGCGCGCTGC ATCCGAAGGC CGTCGCGGTG CTCGACGAAT GGCAGGCGCA AGGCTGGGCC
GCGTGCGACG AGATTGCGAT CACGCACGCC GATGCGCAGC TTGTGGATAA CCCGGCACCG
GCGTCCGCTC GGCGCCCGAC TGCATTGCCG CCGCAACTGA CCGATCAACA GGCGGAGGCG
CTCGACGCGA TCGCGGCGGC GGACGGTTTC GCGCCATTCC TGCTGCACGG CGTGACGGGC
AGCGGCAAGA CCGAGGTGTA TCTGCGCGCG CTCGCCGCGC TGCTCGAGCG GCGGCCCGAA
GCACAGGCGC TCGTCCTCGT GCCCGAGATC AACCTGACGC CGCAGTTCGA AGCGGCGTTT
CGCGCGCGCT TCGCCGCGAC GCTGCCCGCC GATGCGATCG TCACGCTGCA CAGCGGCCTT
GCCGAAGGCG AGCGCGCGCG CCACTGGCTC GCCGCACATA CCGGCCGCGC GCGGATCGTG
CTCGGCACGC GGCTCGCGGT GCTCGCGTCG CTGCCGGCGC TTGCGATGAT CGTCGTCGAC
GAGGAGCACG AGCCGGCCTA CAAGCAACAG GAAGGGTTGC GCTATTCGGC GCGCGATCTC
GCCGTGTGGC GGGCGAAGCA GCTCGCGATT CCGGTCGTCC TCGGCTCGGC GACACCGTCG
CTCGAAACCT GGTGGCAGGC TGAGCAGGGC CGCTACCGGC GGCTCACGCT GACGAAGCGC
GCGGTGGCCG ACGCGGCGCT GCCGACGGTG CGGCTCGTCG ATCTCGAGGA GGAGCGGCGG
CGCGGGCGCG GGTCGATGGG CGGGCTGTCG GGGCCGCTCG TCGCTGCGCT GAAGGCGCGG
CTCGAGCGTG GCGAGCAGAG CCTCGTGTTC CTGAACCGGC GCGGCTATGC GCCCGCGCTC
GCGTGCGACG CGTGCGGCTG GGTCGCAGGC TGCCCGCGAT GCAGCGCGTA TGTCGTGATG
CACAAGCCCG AGCACGCGGT GCGCTGCCAT CACTGCGGCT GGGAGGCGCG CATTCCGCGC
GCGTGCCCGG AATGCGGGAA CGTCGATATC GCGCCGCTCG GCCGCGGCAC GCAGCGCGTC
GAGGAGACGC TCGCGCTCGC CGTGCCGGGC GCGCGGATCC TGCGCATCGA CGCGGACAGC
ACGCGCCGCA AGGGCAGCGC GCAGGCGCTC TTCTCGGACG TGCACGCGGG CGAGGTCGAC
ATCCTCGTCG GCACGCAGAT GATCGCGAAG GGGCACGATT TCCAGCGGGT GTCGCTCGTC
GGCGTGCTGA ATGCGGATAC CGCATTGTTC TCGCACGATT TTCGCGCAAG CGAGCGGCTA
TTCGCGCAAC TGATGCAGGT GAGCGGCCGC GCGGGGCGCG CGGGGCTGCC GGGCGAGGTG
CTGATCCAGA CGCGATATCC GCGTCACGCG CTCTATCACG CGCTCGCGCG CCAGGATTAC
GTGGGGTTCG CCGGCGCGAC GCTCGGCGAG CGGCGCGACG CGCACCTGCC GCCGTTCGTC
TATCAGGCGC TCTTGCGCGC CGAGGGGCGC ACGCTCGATG CGGCGCTCGC CTTCCTGCAG
CAGGCGGCCG ACGCGTTCTC GGGGCTGCCG GGCGCGGAGC GCGTGACGGT GTACGACGCC
GTGCCGATGA CGATCGTCAA GGTGGCCAAT GTCCACCGGG CGCAACTGTT GATCGAGAGC
GCGTCGCGCG CGGCGCTTCA GCACACGCTG CGCGCGTGGC AGCCGCTGCT GCGCGAGCTG
AAGGGCGTGC TGCGCTGGAG CGTCGAGGTC GATCCGCTCG ACATCTGA
|
|---|
| Protein sequence | MADAFVRVAL DHPLPTLFDY RYRGDMPAAP GMLVQVPFGR RSVVGLVCEV TAHTDVPAAK
LKAVDAVCTE LPPLSRHWLE LAAFAADYYQ RGLGEVALPA LPQALRDVPR WGRLLAPELR
YRLLDAGRAA LPDALPARGA ALRRLAQALA DAPALSLAEV RALHPKAVAV LDEWQAQGWA
ACDEIAITHA DAQLVDNPAP ASARRPTALP PQLTDQQAEA LDAIAAADGF APFLLHGVTG
SGKTEVYLRA LAALLERRPE AQALVLVPEI NLTPQFEAAF RARFAATLPA DAIVTLHSGL
AEGERARHWL AAHTGRARIV LGTRLAVLAS LPALAMIVVD EEHEPAYKQQ EGLRYSARDL
AVWRAKQLAI PVVLGSATPS LETWWQAEQG RYRRLTLTKR AVADAALPTV RLVDLEEERR
RGRGSMGGLS GPLVAALKAR LERGEQSLVF LNRRGYAPAL ACDACGWVAG CPRCSAYVVM
HKPEHAVRCH HCGWEARIPR ACPECGNVDI APLGRGTQRV EETLALAVPG ARILRIDADS
TRRKGSAQAL FSDVHAGEVD ILVGTQMIAK GHDFQRVSLV GVLNADTALF SHDFRASERL
FAQLMQVSGR AGRAGLPGEV LIQTRYPRHA LYHALARQDY VGFAGATLGE RRDAHLPPFV
YQALLRAEGR TLDAALAFLQ QAADAFSGLP GAERVTVYDA VPMTIVKVAN VHRAQLLIES
ASRAALQHTL RAWQPLLREL KGVLRWSVEV DPLDI
|
|---|
| |