| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3312 |
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| Symbol | gcvP |
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| ID | 4679261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 3267915 |
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| End bp | 3270842 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639847565 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_994590 |
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| Protein GI | 121599384 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCG AACACCCGGA CCGCCTGATG AACCGCACGC CCCTCTCGCT CGCCGCGCTC
GAAACGCACG ACGCGTTCGC CGAACGCCAT ATCGGCCCCG ACGCCGCCAG CCAGCAGGCC
ATGCTCGACA CGCTCGGCTT CGCGACGCGC GCCGCACTGA TCGACGCCGT GATCCCCGCG
TCGATCCGCC GCGCCGAAAC GCTGCCGCTC GGCCCGTTCG CGCAGCCGAA GAGCGAAGCC
GAAGCGCTCG CCGCGCTGCG CGCGCTCGCG GACAAGAACC AGGTGTTCCG CTCGTACATC
GGCCAAGGCT ACTACGACAC CCACACCCCG GCGGTGATCC TGCGCAACGT GCTCGAAAAC
CCGGCGTGGT ACACCGCGTA CACGCCGTAC CAACCCGAAA TCTCGCAGGG CCGCCTCGAG
GCGCTGCTGA ACTTCCAGCA GATGGTCGCC GACCTGACGG GCCTCGAGAT CTCCAACGCG
TCGCTGCTCG ACGAAGCCAC GGCCGCAGCC GAAGCGATGA CGCTGCTGCA ACGCGTCGGC
AAGCCGCAGT CGAACGTGTT CTACGTCGCC GACGACGTGC TGCCGCAAAC GCTCGAAGTG
ATCAAGACGC GCGCGAAGCC GATCGGCATC GAAGTGAAGT CGGGCCCGGC CGCCGACGCC
GCCGCCGCGA ACGCGTTCGG CGTGCTGCTG CAATATCCGG GCGCGAACGG CGACGTGCGC
GACTACCGCG CGCTCGCCGA CGCGATCCAC GCCGCGGGCG GCCACGTCGT CGTCGCGGCC
GACATCCTCG CGCTCACCGT GCTCATGCCG CCCGGCGAAT GGGGCGCGGA CGTCGCCGTC
GGCAACACGC AGCGCTTCGG CGTGCCGATG GGCTTCGGCG GCCCGCACGC CGCATACATG
GCGGTGCGCG ACGAATTCAA GCGGCAGATG CCGGGCCGCC TCGTCGGCGT GACCGTCGAC
GCGCAGGGCA AGCCCGCGCT GCGCCTCGCG CTGCAAACGC GCGAGCAACA CATCCGCCGC
GAGAAGGCAA CGTCGAACGT CTGCACCGCG CAGGCGCTGC TCGCGATCAT GGCGAGCATG
TACGCGGTCT ACCACGGCCC GCGCGGCCTG AAGACGATCG CGCTGCGCGT GAACCGCATC
GCGGCGCTCC TCGCCGCGGG CATCAGGCAT CTCGGCTACG CAACCGTCAA CGACACGTTC
TTCGACACGC TGACGATCGA CACCGGCGCG CGCACCGCGC AACTCCATGC GTTCGCGCAA
GCGAAGCGCA TCAACCTGCG CCGCGCGGGC GACACGCGAG TCGGCGTGTC GGTCGACGAA
ACGACGACGC GCGCCGATCT CGCCGATCTG CTCACGATCT TCGCGCAGGC CGCGGGCGCG
ACGGCGCCCG ACATCGACGC GCTCGACGCC GGGCTCCTCC CCGCGCCCGC GCTGCCGCCG
AGCCTCGAGC GCACGAGCGC GTACCTGACG CACCACGTGT TCAACCGCCA CCATTCGGAA
ACGGAAATGC TGCGCTACCT GCGCAGCCTG TCGGACAAGG ATCTCGCGCT CGACCGCTCG
ATGATCCCGC TCGGCTCGTG CACGATGAAG CTGAACGCGA CCTCCGAAAT GCTGCCCGTC
ACGTGGCCCG AATTCGGCCG GATCCACCCG TTCGCGCCCG CCGAGCAGAC CGTCGGCTAT
CGCGAGATGA TCGACCAGCT CGAGCAGATG CTCGTCGCGG CAACGGGCTA CGCGGCCGTG
TCGCTGCAGC CGAACGCCGG CTCGCAGGGC GAGTACGCGG GCCTGCTCAT CATCCATGCG
TATCACGAAT CGCGCGGCGA AAGCCACCGC GATGTCTGCC TGATTCCGGC GTCCGCGCAC
GGCACGAACC CGGCGTCGGC GCACATGGCC GGCATGAAGG TCGTGGTGGT CGCGTGCGAC
GCGCAAGGCA ACGTCGACAT CGCCGACCTG AAGGCGAAGG CCGACGCGCA TTCGCACGAC
CTCGCGGCGA TCATGATCAC GTATCCGTCG ACGCACGGCG TGTTCGAGCA GAACGTGCGC
GAGATCTGCG AGATCGTCCA CGCGCACGGC GGCCAGGTGT ACGTCGACGG CGCGAACATG
AACGCGATGG TCGGCCTCAC CGCGCCCGGC CAGTTCGGCG GCGACGTGTC GCACTTGAAC
CTGCACAAGA CCTTCTGCAT CCCGCACGGC GGCGGCGGCC CGGGCGTCGG CCCGGTCGCG
GTCGGCCCGC ACCTCGCGAA ATTCCTGCCG AACCAGCGCT CGACGGGCTA CGCGCGCGGC
GAAGACGGCA TCGGCGCGGT GTCGGCGGCG CCTTACGGCT CGGCGTCGAT CCTGCCGATC
TCGTGGATGT ACATCGCGAT GATGGGCGCG AAGAATTTGA CCGCGGCGAC CGAAACCGCG
ATCCTCAACG CGAACTACAT CGCGAAGCGC CTCGCGCCGC ACTATCCGGT GCTGTATTCG
GGCCCGGGCG GGCTCGTCGC GCACGAATGC ATTCTCGATC TGCGCCCGAT CAAGGATTCG
AGCGGCATCA CCGTCGACGA CGTCGCCAAG CGCCTGATGG ACTACGGCTT TCACGCACCG
ACGATGAGCT TCCCGGTGCC GGGCACGCTG ATGGTCGAGC CGACCGAATC GGAATCGCAG
GAGGAACTGG ACCGCTTCAT CGCGGCGATG ATCGCGATCC GCGACGAAAT CCGCGCAGTC
GAGGAAGGCC GCGCCGACCG CGAGGACAAC CCGCTGCGTC ACGCGCCGCA CACGGCAGCC
GTCGTCACCG CGAACGAATG GCCGCACGCG TACTCGCGCG AGCAGGCCGC GTTCCCGGTC
GCGTCGCTCG TCGCGAACAA GTACTGGCCG CCCGTCGGCC GCGCGGACAA CGCATATGGC
GACCGCAATC TGTTCTGCTC CTGCGTGCCG GTATCGGATT ACGCCTGA
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| Protein sequence | MKLEHPDRLM NRTPLSLAAL ETHDAFAERH IGPDAASQQA MLDTLGFATR AALIDAVIPA
SIRRAETLPL GPFAQPKSEA EALAALRALA DKNQVFRSYI GQGYYDTHTP AVILRNVLEN
PAWYTAYTPY QPEISQGRLE ALLNFQQMVA DLTGLEISNA SLLDEATAAA EAMTLLQRVG
KPQSNVFYVA DDVLPQTLEV IKTRAKPIGI EVKSGPAADA AAANAFGVLL QYPGANGDVR
DYRALADAIH AAGGHVVVAA DILALTVLMP PGEWGADVAV GNTQRFGVPM GFGGPHAAYM
AVRDEFKRQM PGRLVGVTVD AQGKPALRLA LQTREQHIRR EKATSNVCTA QALLAIMASM
YAVYHGPRGL KTIALRVNRI AALLAAGIRH LGYATVNDTF FDTLTIDTGA RTAQLHAFAQ
AKRINLRRAG DTRVGVSVDE TTTRADLADL LTIFAQAAGA TAPDIDALDA GLLPAPALPP
SLERTSAYLT HHVFNRHHSE TEMLRYLRSL SDKDLALDRS MIPLGSCTMK LNATSEMLPV
TWPEFGRIHP FAPAEQTVGY REMIDQLEQM LVAATGYAAV SLQPNAGSQG EYAGLLIIHA
YHESRGESHR DVCLIPASAH GTNPASAHMA GMKVVVVACD AQGNVDIADL KAKADAHSHD
LAAIMITYPS THGVFEQNVR EICEIVHAHG GQVYVDGANM NAMVGLTAPG QFGGDVSHLN
LHKTFCIPHG GGGPGVGPVA VGPHLAKFLP NQRSTGYARG EDGIGAVSAA PYGSASILPI
SWMYIAMMGA KNLTAATETA ILNANYIAKR LAPHYPVLYS GPGGLVAHEC ILDLRPIKDS
SGITVDDVAK RLMDYGFHAP TMSFPVPGTL MVEPTESESQ EELDRFIAAM IAIRDEIRAV
EEGRADREDN PLRHAPHTAA VVTANEWPHA YSREQAAFPV ASLVANKYWP PVGRADNAYG
DRNLFCSCVP VSDYA
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