Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3300 |
Symbol | |
ID | 4679484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 3256408 |
End bp | 3257517 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639847554 |
Product | phage integrase family site specific recombinase |
Protein accession | YP_994580 |
Protein GI | 121600634 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.248425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTCT ACAAACGTAA TAACAGCCCA AATTGGTATT ACCGCCTTAC CCCACCGGGC GGCGGTCCGG TCGTACAGGG CAGCACTGGA ACCAGCAACA AGGCACACGC GCAGGAGCTC TACGATCGGT TGAAAGTAGA GCTGTGGAAC CAAGCAAAGC TCGGTCACAA GCCGCGCTAT CTCTGGAACG ATGCCGTCGT ACGGTACGTT GGCGATCGCG AGGGACTTTC GAGTTTGGAA ACATCGAAGA CACATTTGCG ATGGCTCGAT CCGCATCTGT CCGGCGTCGC ACTCGCGGAT ATCGACCGGG ATCGAGTCGA CGCGATCGCA CACGCGAAGC GTTGCGAGCC GCGCGTTGTC CGGACGCGCA ACGGCCCCAA GCCGATCGGC GGGACGATCG GCGAAGGAAC CGTGCGACGG GTCATTGGAG TGCTGATGGC GGTTCTCCAT GCTGCTGTCG AATGGGAATG GCTCGACCGG GCGCCGGTGT TGAAGCGGCG GAAAACGACA CCCAAGCGAG TGCGATGGAT CACCCCGGCC CAAGCCGAGC GTTTGCTCGC CGAGTTGCCG GCTCATCTGT CCGACATGGC GCGCTTCAGC CTCGAGACTG GCTTACGCCG TTCGAATGTA ACGGGGCTGG AATGGTCGCA GGTCGACCTC GCTCGCCGCG TCGCCTGGAT TCACCCGGAC CAGGCGAAGG CAAGGAAGGC GATCACGGTG CCGCTGTCGG ACACGGCGGT TGATGTGCTG CGTCGCCAGT TGTCGAAACG GCGAGCCGCC GAGCACATCG AACGCGTGTT CGTTTACCGC GGTTCAGCGA TCGGACAGCC GAATACGGCG GCATGGCGAA AGGCACTGAA GCGAGCGGGC ATTCGCGATT TTCGCTGGCA CGATCTGCGG CACACCTGGG CGAGCTGGCA TGTGCAGCGC GGCACGCCGT TGCAGGTGCT CAAGGAGCTC GGCGGCTGGG AAACGTTGGA GATGGTGCAG CGCTACGCGC ATCTGTCAGC CGATCACCTT GCGCGTTGGG TGCAGCCGCA TCTGCGAACG GCCGAGGTAA TCGAACTGGC GTCAGCGTCG GCCGAAACGC CGAAGGTCGC CGCCGGCTGA
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Protein sequence | MSLYKRNNSP NWYYRLTPPG GGPVVQGSTG TSNKAHAQEL YDRLKVELWN QAKLGHKPRY LWNDAVVRYV GDREGLSSLE TSKTHLRWLD PHLSGVALAD IDRDRVDAIA HAKRCEPRVV RTRNGPKPIG GTIGEGTVRR VIGVLMAVLH AAVEWEWLDR APVLKRRKTT PKRVRWITPA QAERLLAELP AHLSDMARFS LETGLRRSNV TGLEWSQVDL ARRVAWIHPD QAKARKAITV PLSDTAVDVL RRQLSKRRAA EHIERVFVYR GSAIGQPNTA AWRKALKRAG IRDFRWHDLR HTWASWHVQR GTPLQVLKEL GGWETLEMVQ RYAHLSADHL ARWVQPHLRT AEVIELASAS AETPKVAAG
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