| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3285 |
|---|
| Symbol | |
|---|
| ID | 4679995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 3242137 |
|---|
| End bp | 3243234 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639847539 |
|---|
| Product | putative branched-chain amino acid ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_994565 |
|---|
| Protein GI | 121598346 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGATC GGCCGGCCGG CGTCGAATCG CCGCTCGTGC ACGAGCGCGG GCGCGAGTGC
CCGTGCGAAC GGCGCCCGAA CGGCGTGCGG CGCGCGCGCT GGCCCCGCCG TGCGCCGGCG
GCCCGCGATC GGCGGCGCCG TTGCGCGCCG CCGCGATGCC GTCGGCGCGG CAAGTGCCGT
CGACGTCTTC GCCGCCCGCC GCGCGCGATC GATCGCTTCG GGCGCGGCGT TCGCCCCGTT
GCCTTCAGCG TGCCGCACGC GCTCGCGCCG CCCGGCACGC GCGGCGATGC ACGAGCCGCC
CGCATCCGCG CTTGCTCGCG GCCCGGCGCG TGCGCCGCAC CCCCTTCGTC AAGGAGTCAG
ACGATCATGC AGCTCGAAGT GAAGAACCTC GTCGTCCATC GTGCGAACAA GCCCGTGCTG
CACGGCGTAT CGCTCGCGGT CACGCCCGGC CGGGTGACGG CGCTCGTCGG CGCGAACGGC
GCCGGCAAAT CGACGCTCGT GATGAGCATC GCGGGCGCGC TGCCCGCGAC GTCGGGCGAC
GTGCTGCTCG GCGGCGCGCC GCTCGGCGCG CTGCGGCCCG AAGCGGTTCG GCGCCTCGGC
GTCGCCGTCG TGCCGGAAGG GCACCACGTG CTGGGCGACC TGACGGTGCG CGACAACCTG
CGCGCGGCGG GCGCGTTTCT GTCGGCGCGG CGGCTGAACG GCGCGATCGA TCGCGCGCTC
GCGATCTTCC CGGAACTCGA GCCGAAGCTC GATGCGCGCG CGAACGATCT GTCCGGCGGG
CAGAAGCAGA TGGTGTGCGT ATCGCAGGCG TTGATCGGCG AGCCGCACAC GCTGCTCATC
GACGAGCTGT CGCTCGGTCT CGCGCCCACC GTGACGAAGC GCCTCGCGCA GACGGTCGCG
CGAATCGCGA ACGATGGCGT CGCGGTACTG CTGATCGAGC AGTTCACGAC GATCGCGCTC
GCGCTCGCGA CGAACGCGTA TGTGCTCGAG CGCGGGCGCG TCGCGTTCGC GGGCAGCGCG
CAAACGCTGC GCGAGCGGCC GGAGATTCTG CACGGCAGCT ACCTCGCGTC GAAGGGAAGC
GGCGCGAACG CCGCGTGA
|
|---|
| Protein sequence | MPDRPAGVES PLVHERGREC PCERRPNGVR RARWPRRAPA ARDRRRRCAP PRCRRRGKCR
RRLRRPPRAI DRFGRGVRPV AFSVPHALAP PGTRGDARAA RIRACSRPGA CAAPPSSRSQ
TIMQLEVKNL VVHRANKPVL HGVSLAVTPG RVTALVGANG AGKSTLVMSI AGALPATSGD
VLLGGAPLGA LRPEAVRRLG VAVVPEGHHV LGDLTVRDNL RAAGAFLSAR RLNGAIDRAL
AIFPELEPKL DARANDLSGG QKQMVCVSQA LIGEPHTLLI DELSLGLAPT VTKRLAQTVA
RIANDGVAVL LIEQFTTIAL ALATNAYVLE RGRVAFAGSA QTLRERPEIL HGSYLASKGS
GANAA
|
|---|
| |