Gene BMASAVP1_A3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3230 
Symbol 
ID4679123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand+ 
Start bp3197557 
End bp3198117 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content65% 
IMG OID639847486 
ProductABC transporter, periplasmic substrate-binding protein 
Protein accessionYP_994513 
Protein GI121600722 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.42671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGA AAAAGACTGC TCTCGACTTC TGGGTCGGCC TCTTCGTAGT GTTGGGCTTT 
CTCGCGTTGC TGTTCCTCGC GCTGAAGGTC GGCAACATGA GCTCGCTGTC GTTTCAGCCG 
ACTTACGCGG TGAAGATGAA ATTCGACAAC ATCGGCGGCC TGAAGCCGCG CGCGGCCGTC 
AAGAGCGCGG GCGTCGTGGT CGGGCGCGTG AAGACCATCG GCTTCGACAC GAACACCTAC 
CAGGCGCTCG TCACGATCGA GCTCGACAAG CAGTACCCGT TCCCGAAGGA TTCGTCGGCG 
AAGATCCTGA CCTCGGGTCT GCTCGGCGAG CAGTACATCG GCCTCGATCC GGGCGGCGAC 
ACGGAAATGC TGAAGGCGGG CGATACGATC ACGATGACGC AGTCGGCGAT CGTGCTCGAG 
AACCTGATCG GCCAGTTCCT GTACAGCAAG GCCGCGGACG CGGGCGGCGC GAAGCCGGGC 
GCCGCCGCAT CGGGCGCGCC GGCGCCCGCG CCGGTGGCGG CATCTGCGGC ATCTGCGGCA 
TCGGGCGCGG CGGCACAGTG A
 
Protein sequence
MTMKKTALDF WVGLFVVLGF LALLFLALKV GNMSSLSFQP TYAVKMKFDN IGGLKPRAAV 
KSAGVVVGRV KTIGFDTNTY QALVTIELDK QYPFPKDSSA KILTSGLLGE QYIGLDPGGD 
TEMLKAGDTI TMTQSAIVLE NLIGQFLYSK AADAGGAKPG AAASGAPAPA PVAASAASAA 
SGAAAQ