Gene BMASAVP1_A3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3206 
SymbolaroK 
ID4678508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand+ 
Start bp3171032 
End bp3171661 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID639847462 
Productshikimate kinase 
Protein accessionYP_994489 
Protein GI121599022 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.289523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGAGCCA GGCTCGACAA GGCGGGCGCT TTGCCAGTAA GCTGCGCGAC ACACTCACTG 
AAGCAGAGGA AGCCGTTGCA AGCGCGGGAC CCACACGTGA ACGTAATTTT CGTCGGGCTC 
ATGGGGGCGG GTAAGACCAC CGTGGGCCGG GCGGTCGCGC GCCGGCTCGA CAGACCCTTC 
TTCGATTCGG ATCACGAGAT CGAGGCGCGC ACCGGCGCGC GCATTCCGGT CATCTTCGAA 
CTCGAGGGCG AAGCGGGCTT CCGTGACCGC GAGGCGCAGA TGATCGCCGA GCTCACGCAG 
CGCGAGAACA TCGTGCTGGC GACGGGCGGC GGCGCGATCC TGCGCCCCGA GAACCGCAAG 
CTGCTTCACG AACGGGGCCT CGTCGTCTAT CTGCGCGCGA ATCCGCACGA TCTCTGGCTG 
CGCACCCGCA AGGACAAGAA TCGCCCGCTG TTGCAGACCG ACGATCCGAA AGCCAAGCTC 
GAAGCGCTGT ACGAAGCGCG CGATCCGCTC TACCGCGAAT GCGCGCACTT CGTCATCGAA 
ACCGGGCGGC CGTCCGTCAA CGGGCTCGTC AACATGGTGC TGATGCAGCT CGAAATGGCG 
GGCATCGTCG CCAAGCCACT CCAAGCATGA
 
Protein sequence
MGARLDKAGA LPVSCATHSL KQRKPLQARD PHVNVIFVGL MGAGKTTVGR AVARRLDRPF 
FDSDHEIEAR TGARIPVIFE LEGEAGFRDR EAQMIAELTQ RENIVLATGG GAILRPENRK 
LLHERGLVVY LRANPHDLWL RTRKDKNRPL LQTDDPKAKL EALYEARDPL YRECAHFVIE 
TGRPSVNGLV NMVLMQLEMA GIVAKPLQA