| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3205 |
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| Symbol | |
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| ID | 4682023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 3169638 |
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| End bp | 3171026 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639847461 |
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| Product | type II/III secretion system protein |
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| Protein accession | YP_994488 |
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| Protein GI | 121600460 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.278596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCATCGG CGGGGTTGCA AGCGCAGGAG GCCGCGCTGG AGGGGCCGCC CGTGCCGCTC
GCGCCGGCGC AACGCATGAG CGACGAGAGC GACGAGCATC GTTCGTCGCC GCCGGCCGCC
GGCGCCGTAT CGACCGCGAG CGTCGCCGGC ACCGGCACCG AGACGGGCGA TCCATCCGGC
GACAATCGCC CGATCTCCAT CAATCTGCAA CAGGCGAGCC TCGCCGCGGT CTTCGATGCA
TTCGCGCGTT TCACGGGCCT CAATATCGTG GTCAGCGAGC GGGTGCGCGG CACGGTGTCG
TTGCGTCTGA ACAATGTCCG CTGGCGCAGT GCGTTCGATG CGCTGCTGGA CGCCCACGGC
CTCGCGATGG CGCGGCGCGG CAGCGTGATA TGGGTGGCGC CCGTCGCGGA ACTCGCCGAG
CGCGAGCGCC AGCGTTTCGA TGCGCATGCG CGCGCCGCCC AGCTCGAGCC GCTCGCGAGC
CGCGGCTTCG TGCTGCGCTA CGCGCGCGCG GCCGACGTGC AGCGTCTGCT CGCAGGCTCG
GCCGGCCAGC GCATCCTGTC CAAGCGCGGC TCGGTGTTGG CCGATCCTCG GACGAATCTG
CTGTTCGTCA CCGATCTGTC CGGACGCCTC GCGCAGATCG CCGATCTGAT CGGCAAGCTC
GATACGCCGT CGCGGCAGGT ATTGATCGAA GCGAGGATCG TCGAGGGCGA TCGCGGGTTC
TCGCGCAATC TCGGCGCGCG CCTCGCGCTG CGCGCGCCCG ATGCGGGCGA ACGCGCGACG
GGCATCGTCG CCGGCCGCAA CGGCACGCTG GCGGAGCTCG CCGCCAGGCC GATCAGCGGC
TTCGACGCGG CGACGGCCGG CCTCACGCTG TTCGCCGCGC GCGCGAGCCG CCTGCTCGAC
GTCGAGTTGA GCGCGCTCGA GGCCGAGGGC CGGGGCCAGA TCGTGTCGAG CCCGCGCGTC
GTGACGGCGG ACCGGACCAA GGCCGTCGTC GAGCAGGGCG CCGAGCTGCC GTACCAGGCG
AAGGTCGGCA ACGGCGTATC CGGCGTCCAG TTCCGGCGCG CGACCTTGAA GCTCGAGGTC
GAGCCGCAGA TCACGCCCGA CGGGCGTGTG ATTCTCGATC TCGACGTCGC GAAGGATAGC
GTCGGCGAGG AAACCGCGTC CGGCCCCGCG ATTCATACGA AGCATGTGCA GACGCGAGTG
GAAGTCGAAA ACGGCGGAAC GGTGTCGATC GGCGGGATTT TCGAGAGCGA CGACCGCGAC
GATGTGACTC GCGTGCCGCT CTTGGGCAAA ATACCGGTGT TGGGGGCGCT TTTCAGGCAT
CGCGCGCAGC GTGCGCAGCG CAGCGAGCTC GTCGTCTACA TCACGCCGAC CGTCGTGATC
GGGCCCTGA
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| Protein sequence | MASAGLQAQE AALEGPPVPL APAQRMSDES DEHRSSPPAA GAVSTASVAG TGTETGDPSG
DNRPISINLQ QASLAAVFDA FARFTGLNIV VSERVRGTVS LRLNNVRWRS AFDALLDAHG
LAMARRGSVI WVAPVAELAE RERQRFDAHA RAAQLEPLAS RGFVLRYARA ADVQRLLAGS
AGQRILSKRG SVLADPRTNL LFVTDLSGRL AQIADLIGKL DTPSRQVLIE ARIVEGDRGF
SRNLGARLAL RAPDAGERAT GIVAGRNGTL AELAARPISG FDAATAGLTL FAARASRLLD
VELSALEAEG RGQIVSSPRV VTADRTKAVV EQGAELPYQA KVGNGVSGVQ FRRATLKLEV
EPQITPDGRV ILDLDVAKDS VGEETASGPA IHTKHVQTRV EVENGGTVSI GGIFESDDRD
DVTRVPLLGK IPVLGALFRH RAQRAQRSEL VVYITPTVVI GP
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