Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3197 |
Symbol | lysA |
ID | 4678810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 3160448 |
End bp | 3161719 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639847453 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_994480 |
Protein GI | 121598495 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAG CTGCATTCGA CTACGTCGAC GGCACGCTCC ACGCCGAGCG CGTGAGCACC GTCGAGCTCG CCGAGCGTTT CGGCACCCCG CTCTTCGTCT ATTCGCGCGC CGCGCTCACC GCGGCCTACG AGGCCTACGC GAAAGCCTGC GCCGGCCGCC GCGCGTCGAT TCACGTCGCC GTGAAGGCGA ACAGCAACCT CGGCGTGCTG AACGTGTTCG CGCGTCTCGG CGCGGGCTTC GACATCGTGT CGGGCGGCGA GCTCGCGCGC GTGCTCGCGG CGGGCGGCCG CGCGCGGGAC GTCGTGTTCT CGGGCGTCGG CAAGAGCGCC GACGAAATGC GCGTCGCACT CGAAGCAGGC GTGAAGTGCT TCAACGTCGA ATCGATCCCG GAGCTCGACC GGCTGAACGC CGTCGCGGCA TCGCTCGGCA AGCGCGCGCC CGTGTCGCTG CGGGTGAATC CGGACGTCGA CCCGAAGACG CATCCGTACA TCTCGACGGG GCTGAAGGCA AACAAGTTCG GTATCGCGTT CGACGACGCG CGCGCGACGT ACCGCGCGGC CGCCGCGCTG CCGAACCTCG AAGTCGTCGG CATCGACTGC CACATCGGCT CGCAGATCAC CGAGCTGAGC CCGTACCTCG ACGCGATCGA CAAGCTGCTC GATCTCGTCG AGCGGATCGA GGCGGACGGC GTGCAGATCC ATCACGTCGA CGTCGGCGGC GGGCTCGGCA TCACGTATGA CGACGAAACG CCGCCCGACA TCGGCGCCTA CGTGCGCGCG GTGCTCGCGC GCATCGATGC GCGCGGCCAC GGCCAGCGCG AAATCTGGTT CGAGCCGGGC CGCTCGCTGA CGGGCAACGC CGGCATTCTG CTCACGCGCG TCGAATTCCT GAAGCAGGGC GAAGAGAAGA ACTTCGCGAT CGTCGACGCG GCGATGAACG ACCTCGCGCG CCCCGCGATG TACCAGGCGT TTCACGCGAT CGTGCCGGTT GCGCCGCGCA CGGACGTCGC GGCCGCGGTG TACGACATCG TCGGTCCCGT CTGCGAGAGC GGCGACTGGC TTGGGCGCGA GCGCTCGCTC GCGATCGCGC CCGGCGATCT GCTCGCGATC CGCTCGGCGG GCGCGTATGG CTTCACGATG AGCTCGAACT ACAATACGCG GCCGCGCGCG GCGGAAGTGA TCGTCGATGG CGCGAACGCG CATCTGGTAC GGCCGCGCGA GACGGTCGAA AGCCTGTTCG AGCACGAAAC GATCCTGCCC GAAGGCCGGT AA
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Protein sequence | MTQAAFDYVD GTLHAERVST VELAERFGTP LFVYSRAALT AAYEAYAKAC AGRRASIHVA VKANSNLGVL NVFARLGAGF DIVSGGELAR VLAAGGRARD VVFSGVGKSA DEMRVALEAG VKCFNVESIP ELDRLNAVAA SLGKRAPVSL RVNPDVDPKT HPYISTGLKA NKFGIAFDDA RATYRAAAAL PNLEVVGIDC HIGSQITELS PYLDAIDKLL DLVERIEADG VQIHHVDVGG GLGITYDDET PPDIGAYVRA VLARIDARGH GQREIWFEPG RSLTGNAGIL LTRVEFLKQG EEKNFAIVDA AMNDLARPAM YQAFHAIVPV APRTDVAAAV YDIVGPVCES GDWLGRERSL AIAPGDLLAI RSAGAYGFTM SSNYNTRPRA AEVIVDGANA HLVRPRETVE SLFEHETILP EGR
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