Gene BMASAVP1_A3195 details

Gene Information

• Locus tag: BMASAVP1_A3195
• ID: 4681806
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 3159476
• End bp: 3160189
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639847451
• Product: putative sulfite oxidase subunit YedZ
• Protein accession: YP_994478
• Protein GI: 121601393
• COG category: [S] Function unknown
• COG ID: [COG2717] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.339313
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATCCT CGACATTTGC CGGCTCGGCA AGCCCGGGCG CCGGCGCGCG CGGCCGCGCA 
CCGCGCCGGG ATGCCGGCCG CGCGGGCGGC GCGCCCGGCT GGCTCGCGCC CGTGAAGATC 
GCCGCGTTCG TCGCGGCGCT GTATCCGCTC GCGCGTATCG TGTTCTTCGG CGTGACGGAC 
CGGCTCGGCG CGAACCCGAT CGAGTTCGTC ACGCGCTCGA CGGGGCTCTG GACGCTCGTG 
TTCCTGTGCA TCACGCTCGC CGTCACGCCG CTGCGCCGGC TGACGGGCAT CAACGCGCTG 
CTGCGGTTGC GGCGCATGCT CGGGCTCTAC GCATTCTTCT ACGCGGTGCT GCACTTCACG 
ACCTACATCT GGTTCGACAA GTGGTTCGAT GTGGTGGAGA TCGCGAAGGA CGTCGTGAAG 
CGTCCGTTCA TCACCGTCGG CTTCGCCGCG TTCGTGCTGC TGATTCCGCT TGCCGCGACG 
TCGCCGCGCG CGATCGCGAG GCGGCTCGGC CGGCACTGGC AGACGCTGCA CAAGGCGATC 
TATGCGATCG CCGCGTTCGG CATCCTGCAT TTCTGGTGGA TGAGGGCGGG CAAGCACGAT 
CTCGCACTGC CGAAGCTGTA CGGCGCGATC GTGCTCGTGC TGCTCGGCTG GCGCGTGCTC 
GTGTGGGCGC GGCAACGCTG GGGCGCAGCG GCGGCGGGCG GACGCGCGTC GTAG 

 

Protein sequence

MQSSTFAGSA SPGAGARGRA PRRDAGRAGG APGWLAPVKI AAFVAALYPL ARIVFFGVTD 
RLGANPIEFV TRSTGLWTLV FLCITLAVTP LRRLTGINAL LRLRRMLGLY AFFYAVLHFT 
TYIWFDKWFD VVEIAKDVVK RPFITVGFAA FVLLIPLAAT SPRAIARRLG RHWQTLHKAI 
YAIAAFGILH FWWMRAGKHD LALPKLYGAI VLVLLGWRVL VWARQRWGAA AAGGRAS