Gene BMASAVP1_A3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3174 
SymbolrpsL 
ID4680749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp3138785 
End bp3139165 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content62% 
IMG OID639847430 
Product30S ribosomal protein S12 
Protein accessionYP_994461 
Protein GI121601470 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00103484 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACCA TCAATCAACT GGTTCGCAAA GGCCGTGCGT CGGAAACGAC GAAGAGCAAG 
AGCCCGGCCT TGCAGGACTG CCCCCAGCGT CGCGGCGTGT GCACCCGTGT GTACACGACG
ACGCCGAAGA AGCCGAACTC GGCACTCCGT AAGGTCGCCA AGGTTCGTCT GACGAATGGC
TTCGAAGTGA TTTCGTACAT CGGCGGTGAA GGCCACAACC TGCAGGAGCA CTCGGTTGTG
CTGATCCGCG GCGGCCGTGT GAAGGACTTG CCGGGTGTGC GTTACCACAT GGTTCGCGGC
TCGCTGGATA CGCAGGGCGT CAAGGACCGT AGGCAGGCTC GCTCGAAGTA CGGCGCGAAG
CGTGCGAAGG CGGCGAAGTA A
 
Protein sequence
MPTINQLVRK GRASETTKSK SPALQDCPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG 
FEVISYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHMVRG SLDTQGVKDR RQARSKYGAK
RAKAAK