Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3114 |
Symbol | paaD |
ID | 4681618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 3086948 |
End bp | 3087568 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639847371 |
Product | phenylacetic acid degradation protein PaaD |
Protein accession | YP_994402 |
Protein GI | 121601438 |
COG category | [R] General function prediction only |
COG ID | [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme |
TIGRFAM ID | [TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000394785 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCCT TCCCCGCCTC CGCCCTCGGC CAACCGACCG CCGCCGATGC CCGTGAGGGC CGGCGCCCCG TCACCGGCCG CGCCGCCGCG CCCGGCGACG ATCCGCTCGT CGAGCGCGCG TGGAGCGCGC TCGAAGCGGT GCCCGATCCC AAGATACCGA TCGTGTCGAT CCGCGAGCTC GGCATCCTGC GCGACGTGCG CCGCGCCTCG GACGGCGCCC TCGAAGTCGT GATCACGCCG ACCTATTCCG GCTGCCCGGC GATGCAGCAG ATCGCCGAGG ACATCGGCGC CGCGCTCCGG CAAGCGGGCA TCGCGCCGCA CCGAATCGCA ACCGTGCTCG CTCCCGCGTG GACGACCGAC TGGATCACCG CCGACGCCCG CGAGAAGCTC CGCGCATACG GCATCGCGCC GCCCGTCGGC CAATGCGGCG AGGCGCGCGG CGCGCACGCG GCCGCGCCGC GCGTCGTGCG CTTCATGCCG AAGCCGCCGG CCGCGCCGCT CTGCCCGCGC TGCGGCTCCG CGCATACCGA GCGGCTCGCG CAATTCGCGT CGACCGCGTG CAAGGCGCTC TATCGCTGCC TCGACTGCCG CGAACCCTTC GACTACTTCA AACCTTATTG A
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Protein sequence | MPAFPASALG QPTAADAREG RRPVTGRAAA PGDDPLVERA WSALEAVPDP KIPIVSIREL GILRDVRRAS DGALEVVITP TYSGCPAMQQ IAEDIGAALR QAGIAPHRIA TVLAPAWTTD WITADAREKL RAYGIAPPVG QCGEARGAHA AAPRVVRFMP KPPAAPLCPR CGSAHTERLA QFASTACKAL YRCLDCREPF DYFKPY
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