Gene BMASAVP1_A3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3023 
Symbol 
ID4680570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp2999728 
End bp3001242 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content69% 
IMG OID639847281 
Productcarbohydrate porin 
Protein accessionYP_994317 
Protein GI121599956 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3659] Carbohydrate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA AGACCCTCCA TCAAATGCTC GTCAAATCCG GCGTCGCCTC CGGCCTGCCG 
TTGTTGCTGT CGCTCGGCAT CGTGCAGCCC GCGCTCGCGC AGGCGTCGAG CCCCGCGGCA
GCCCCCGCCG AGAACGCCGC GCCGCCGGCA CCCGCCACGC GGGCCCCGGA TGGCGTGCCC
GGCGGAAACG GCGCGACAGC CGCGCAGACG GATGCCGCCC CCACCGGCTT CTGGGATCGC
TCGAACCTGT TCGGCGACAT GGGCGGCCTG CGCACCAAGC TCGGCGATCA CGGGATCACG
CTGAATCTGC AGGAAACGAG CGAGTACCTG CGCAATCTGT CGGGCGGCAC AAGCCGCGGC
GGCGCCTATG ACGGCCTCAC GCAATTCGGC TTCAGCGTCG ACACCGAAAA GGCGATCGGG
CTGCCGGGCG GCACGTTCAA CGTGTCGGGC CTGCAGATTC ACGGCACGAG CCTCACGGCG
CGCAACCTGC AGTTGCTGCA GACGGCAAGC GGCATCGAGG CCGAGGCCAC GACGCGCCTC
TGGGAGCTGT GGTACCAGCA GTCGTTCGCG AACGGCCGCG CCGACGTGAA GGTCGGCCAG
CAAAGCCTCG ACCAGGAATT CATGGTGAGC CAGTACGCGA GCACGTTCAT CAACGCGACG
TTCGGCTGGC CCGTGCTGCC CGCCGTCGAC ATGCCGGCGG GCGGCCCCGC CTATCCGCTG
TCGTCGCTCG GCGTGCGGCT GCGCGCGAAG CCATCCGATG CATGGACCGT GATGGCGGGC
GTGTTCGACG GCAATCCGGC GGGCGGCGTG GGCGACGCGC AACAGCTCAA TCGGCACGGC
ACGAATTTCA ACCTGCGCAA CGGCGCGCTC TTCATCGGCG AGCTCCAGTA CGCGCTCAAC
GCGCCGCCCG CCGATCCGAA GGCGCCGCAG GCGGGGCTGC CCGGCATGTA CAAGCTCGGC
GTCTGGTACA ACTCCGAGCG CTTCGCCGAT CCGCGCTACG ACACGAACGG CGTGCCGCTC
GCCGATCCGG CGAGCAACGG CGTCGCGGCG ACGCATCGCG GCAACTACGG CTTCTATGCG
GTCGCGGATC AGATGGTATG GCGGCCGGGC GCGGACAGCC CGCGCTCGCT GAACGTGTTC
GCGCGCGTGA TGGGCGCGCC CGGCGATCGC AACGCCGTCG ACTTCACGCT GAACGCGGGC
GTCACGCTCA AGGCGCCGTT CGCAGGACGC GACAACGACA CGGCGGGGCT TGCCGTCAGC
TACGCGAAGA TCGGTTCGCG CGCGCGCGGC GCCGACGGCG ACACCGGCGT GTTCCAGACG
CCCGGCTATC CGGTGCGCCG CGCGGAAACG CTGATCGAGG CGACCTACCA GTATCAGGTG
ACGCCGTGGT GGCAACTGCA GGGGGATTTC CAGTACGCAT TCCGGCCGGG CGGCGGCATT
CCGAACCCGA ACGAGCCGGG CTCGCGTATC GGCAACGAAG CGATCGTCGG CGTACGCACG
ACGATCACGT TCTGA
 
Protein sequence
MKKKTLHQML VKSGVASGLP LLLSLGIVQP ALAQASSPAA APAENAAPPA PATRAPDGVP 
GGNGATAAQT DAAPTGFWDR SNLFGDMGGL RTKLGDHGIT LNLQETSEYL RNLSGGTSRG
GAYDGLTQFG FSVDTEKAIG LPGGTFNVSG LQIHGTSLTA RNLQLLQTAS GIEAEATTRL
WELWYQQSFA NGRADVKVGQ QSLDQEFMVS QYASTFINAT FGWPVLPAVD MPAGGPAYPL
SSLGVRLRAK PSDAWTVMAG VFDGNPAGGV GDAQQLNRHG TNFNLRNGAL FIGELQYALN
APPADPKAPQ AGLPGMYKLG VWYNSERFAD PRYDTNGVPL ADPASNGVAA THRGNYGFYA
VADQMVWRPG ADSPRSLNVF ARVMGAPGDR NAVDFTLNAG VTLKAPFAGR DNDTAGLAVS
YAKIGSRARG ADGDTGVFQT PGYPVRRAET LIEATYQYQV TPWWQLQGDF QYAFRPGGGI
PNPNEPGSRI GNEAIVGVRT TITF