Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A2916 |
Symbol | hslV |
ID | 4681928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 2902821 |
End bp | 2903357 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639847174 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_994210 |
Protein GI | 229008325 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0771725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAAT TTCACGGCAC GACGATTCTC TCCGTGCGGC GCGGCGACAA GGTCGCGCTC GGCGGCGACG GCCAGGTCAC GCTCGGCAAT ATCGTGATGA AGGGCGGTGC GCGCAAGGTG CGCCGCATCT ACAACAACCA GGTGCTCGTC GGCTTCGCGG GCGGCACGGC CGACGCCTTC TCGCTGCTCG ACCGCTTCGA GGCGAAGCTC GAAAAGCATC AGGGCAACCT CACGCGCGCG GCCGTCGAAC TCGCGAAGGA CTGGCGCACC GACCGCCTGC TGCGCCGTCT CGAGGCGATG CTGATCGCGG CCGACGCGAC GACGACGCTC GTCATCACCG GCAACGGCGA CGTGCTCGAC CCGGAAGGCG GAATCTGCGC GATCGGCTCG GGCGGCTCGT ACGCGCAGGC CGCCGCGCGC GCGCTCGCCG AGAATACCGA TCTGTCCCCG CGCGAGATCG TCGAGAAGGC GCTCGGGATC GCGGGCGACA TGTGCATCTA CACGAATCAC AACCGGATCA TCGAGACCAT CGAGTAA
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Protein sequence | MEQFHGTTIL SVRRGDKVAL GGDGQVTLGN IVMKGGARKV RRIYNNQVLV GFAGGTADAF SLLDRFEAKL EKHQGNLTRA AVELAKDWRT DRLLRRLEAM LIAADATTTL VITGNGDVLD PEGGICAIGS GGSYAQAAAR ALAENTDLSP REIVEKALGI AGDMCIYTNH NRIIETIE
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