Gene BMASAVP1_A2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2916 
SymbolhslV 
ID4681928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp2902821 
End bp2903357 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID639847174 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_994210 
Protein GI229008325 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0771725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAAT TTCACGGCAC GACGATTCTC TCCGTGCGGC GCGGCGACAA GGTCGCGCTC 
GGCGGCGACG GCCAGGTCAC GCTCGGCAAT ATCGTGATGA AGGGCGGTGC GCGCAAGGTG
CGCCGCATCT ACAACAACCA GGTGCTCGTC GGCTTCGCGG GCGGCACGGC CGACGCCTTC
TCGCTGCTCG ACCGCTTCGA GGCGAAGCTC GAAAAGCATC AGGGCAACCT CACGCGCGCG
GCCGTCGAAC TCGCGAAGGA CTGGCGCACC GACCGCCTGC TGCGCCGTCT CGAGGCGATG
CTGATCGCGG CCGACGCGAC GACGACGCTC GTCATCACCG GCAACGGCGA CGTGCTCGAC
CCGGAAGGCG GAATCTGCGC GATCGGCTCG GGCGGCTCGT ACGCGCAGGC CGCCGCGCGC
GCGCTCGCCG AGAATACCGA TCTGTCCCCG CGCGAGATCG TCGAGAAGGC GCTCGGGATC
GCGGGCGACA TGTGCATCTA CACGAATCAC AACCGGATCA TCGAGACCAT CGAGTAA
 
Protein sequence
MEQFHGTTIL SVRRGDKVAL GGDGQVTLGN IVMKGGARKV RRIYNNQVLV GFAGGTADAF 
SLLDRFEAKL EKHQGNLTRA AVELAKDWRT DRLLRRLEAM LIAADATTTL VITGNGDVLD
PEGGICAIGS GGSYAQAAAR ALAENTDLSP REIVEKALGI AGDMCIYTNH NRIIETIE