Gene BMASAVP1_A2801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2801 
Symbolsun-2 
ID4681859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp2785220 
End bp2786629 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content72% 
IMG OID639847059 
Productribosomal RNA small subunit methyltransferase B 
Protein accessionYP_994096 
Protein GI121599506 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGA CTCGCCCTTC CCGTTCCCGC GCATCCGGCG CGCCCGCTCG TGCGCCGCGC 
CTGTCGGCGC TGCATCTCGT TCCCGATTCG CTAGGCTTCG CGCTCGACGG CGCCGCGCAG
GCGGTCGACG CGGTCGATCG CGGCGCCGCG CTGCCCGCGG CGCTCGCCGC CGTTCACGCA
GCGCTGCCTT CGAACGCGCA GGCGGCGTCG CGCGGCGCGA TCCAGGACAT CGGGTATCGC
GCGATGCGCC GCCGCGGCAC GGCGGACTGG CTGATCGCGC AACTCGTCGC GAAGGCGCCG
CCGGCGCACG TGCATGCGCT TCTCGTCTGC GCGTTCGCGC TCCTCGTCGA CGACGAGCAC
GCCGCTTATG CGCCCTTCAC CGTCGTCGAT CAGGCCGTGA CCGCGATCGG CGCGCGCCGC
GAGTGCTCGT TTGCGAAGGG GCTCGTCAAC GCGGTGCTGC GCCGGTTTCT GCGCGAGCGG
GCCGCGTGGC TCGAGCGGCT GCAGGCCGAT CGGCGCGCGC TTTGGAACTA CGAGCCGTGG
TGGATCGATG CCGTCGAGCG CGCGTGGCCC GATGCATGGC AGCGCATTCT CGCCGCGGGC
GATGCGCCCG GCCCGCTCAC GCTGCGCGTG AATGCGCGCC GGATGACGGC GGACGCGTAT
CTCGACACGT TGCGCGCCGA GCGGATCGAC GCCGAGAAGA TCGGCCTTCA CGCGATACGG
CTTGCATCGG CGCGGCCCGT CGAGCGCATT CCGGGCTTCG CGGACGGCAT CGTGTCGGTG
CAGGACGCCG GCGCGCAGCT CTCGGCCGAA TGGCTCGGCG CGCGCGACGG CATGCGCGTG
CTCGACGCGT GCGCGGCGCC CGGCGGCAAG ACGGGCCACA TTCTCGAGCT CGCGCACGCC
GAGGTGGTCG CGCTCGAAAG CGATCCGGCG CGCGCGCCGC GCATCGGCGA AAATCTCGCG
CGGCTGTCGC TCACGGCCGA CGTGCGCGTC GGCGACGCGG CAGACCCCGC GCAATGGCAC
GACGGACGTC CGTTCGACCG GGTCCTCGCC GATGTGCCGT GCTCCGCGTC GGGCATCGTG
CGCCGCCATC CGGACATCCG CTGGCTGCGC CGCGCGGCCG ACATTCCCGC GCTCGTCGCC
GAGCAGCGGC GCATCCTGAG CGCGCTCTGG CCGCTCGTGA AACCCGGCGG AGAGTTGCTG
TACGTGACCT GCTCGATCTT TCCGGAAGAG GGCGAGCTGC AGGCGCGCTG GTTTGGAGAC
GCCTGTCAAG ATGCGGTACG ATTGGACGCG CCCGGGCAGT TGCTGCCGCA GGGCGCGACA
GGCGGGGCGC CGGCCGTCGG GGGATCGGGC GAGTCCGGCC GGCATGTCGA TCACGACGGA
TTTTTCTACG CGCGCTTTCA GAAACGGTGA
 
Protein sequence
MTQTRPSRSR ASGAPARAPR LSALHLVPDS LGFALDGAAQ AVDAVDRGAA LPAALAAVHA 
ALPSNAQAAS RGAIQDIGYR AMRRRGTADW LIAQLVAKAP PAHVHALLVC AFALLVDDEH
AAYAPFTVVD QAVTAIGARR ECSFAKGLVN AVLRRFLRER AAWLERLQAD RRALWNYEPW
WIDAVERAWP DAWQRILAAG DAPGPLTLRV NARRMTADAY LDTLRAERID AEKIGLHAIR
LASARPVERI PGFADGIVSV QDAGAQLSAE WLGARDGMRV LDACAAPGGK TGHILELAHA
EVVALESDPA RAPRIGENLA RLSLTADVRV GDAADPAQWH DGRPFDRVLA DVPCSASGIV
RRHPDIRWLR RAADIPALVA EQRRILSALW PLVKPGGELL YVTCSIFPEE GELQARWFGD
ACQDAVRLDA PGQLLPQGAT GGAPAVGGSG ESGRHVDHDG FFYARFQKR